Candidatus Ishikawaella capsulata: ICMP_506
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Entry
ICMP_506 CDS
T04149
Symbol
mrdA
Name
(GenBank) transpeptidase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
icp
Candidatus Ishikawaella capsulata
Pathway
icp00550
Peptidoglycan biosynthesis
icp01100
Metabolic pathways
icp01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
icp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ICMP_506 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ICMP_506 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
icp01011
]
ICMP_506 (mrdA)
Enzymes [BR:
icp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
ICMP_506 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
icp01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
ICMP_506 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
DUF6236
Motif
Other DBs
NCBI-ProteinID:
BAH83353
UniProt:
C5WDE7
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All DBs
Position
574315..576069
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AA seq
584 aa
AA seq
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MIIFIMCIVLIKIYYLQILQFKENNILATLNHIQFLSINPNRGNIYDRNGILLAWDRIIY
QLELIPEKVNNIEKTLYQLKPIIDLTDEEINLFKEKEEHDGKWNPIVLKNNLNYNQIVRL
SVSHYLFPDIKITTSSQRYYPYGSILAHVIGYVSPEGDINKDDKYQTCVYKPIGMSGIEN
YYNKLLYGIDGYKKLQVNNTSRVVRQLDYKYPEVGKDIWLTIDLELQQYIYNILAGERAI
VIVSDPNTGEIVAFVSTPSYNPNLFVNGVSQKTYEKLSEENNKPLYNRGTQAVYPPASTI
KPYMAIAALSTGILYENTKLLDARLWKLPGSKTRYYDWKKKGLSYITIRKALEESSDTFF
YQVAYNLGIHRISEWMQKFGFGILTGIDLPKENPANVPTREWKKHTLHNYWYTGDTIPLG
IGQGYFSTTPLQIHKALITLISNGLIKIPHLLRYICVNNKKIYYHNFPDNVIKEIKSSTW
KIVKDGMYGVANSKNGTAFSVFNKTTYKIAAKSGTAQLFSIKKRDKYNLKTIAINMRDHK
LMNAFAPYDKPTIAITLILENGGCGKQKIGHIMRNILDHIILGK
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
ttgattatttttataatgtgcattgtattaataaaaatctactatttacaaatcctgcaa
tttaaagagaataatattcttgctactttgaatcatatacagtttttatctataaaccct
aatagaggtaacatttatgaccgtaatggaatattattggcatgggatcgtattatatat
caattagaattaatacctgaaaaggttaataatatagaaaaaacactataccaactgaaa
ccgattattgatcttacggatgaggagataaatctttttaaagaaaaagaagagcatgat
ggtaaatggaatcccattgtattaaagaataatctcaattataatcaaattgtcagatta
tcagttagtcattacctttttcctgatattaaaataacaacatcttcacaaagatattat
ccatatggttcaatcttggcacatgtaattggttatgtttctcctgagggagatattaac
aaagatgataaatatcaaacttgtgtttataaaccaattggtatgtcaggtattgaaaat
tattacaacaaattactttatggaatagatggctataagaaattacaagtgaataacact
agtagagtagtgcgtcaattagactacaaatatcctgaagttggaaaagatatatggtta
actatagatcttgaacttcagcaatacatttataatattttagctggtgaacgcgctata
gttatcgttagtgatccaaataccggtgaaattgtagcattcgtatctactcctagttat
aatcctaatttattcgtcaatggggtatcacaaaaaacttatgaaaagttatcagaagag
aataataaacccttatataatcgggggacccaagctgtttatccaccggcttctacaatt
aaaccatatatggcaattgccgcattaagcacgggtattctttatgagaatactaaacta
ttagatgcaaggttgtggaaattaccaggatccaagacacgttactatgactggaaaaaa
aagggacttagctatataactatcagaaaagctttagaagaatcatctgacacgtttttt
tatcaagtcgcatataacttgggaatacatcgcatatctgaatggatgcagaaatttggg
ttcggcatacttacaggtatcgatttaccaaaggaaaatcccgcaaatgtgccaacacgg
gaatggaaaaaacatactttacataattattggtatacaggggatactatccctttgggt
ataggtcagggttattttagtactactcccttacaaatacataaggctttaattacatta
attagtaacggtttaataaaaatacctcacttattacgctatatatgtgtaaataataaa
aagatatattatcataattttcccgataatgttattaaagagattaaatcttccacttgg
aagattgttaaagatggtatgtatggagtggcaaatagtaaaaatggaacagcattttct
gtatttaataagactacttataaaattgctgcaaaatctggtactgctcaactttttagt
ataaaaaaacgtgataagtataatttaaagactatagctataaatatgcgtgatcataaa
ttaatgaacgcttttgcaccttatgataaacctaccatagctattactctaatattagaa
aatggaggttgtggtaagcaaaaaataggacatatcatgcgaaatatattagatcatatt
attttaggtaaataa
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