Isoptericola dokdonensis: I598_0143
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Entry
I598_0143 CDS
T04384
Symbol
fpg1
Name
(GenBank) Formamidopyrimidine-DNA glycosylase 1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ido
Isoptericola dokdonensis
Pathway
ido03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ido00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
I598_0143 (fpg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ido03400
]
I598_0143 (fpg1)
Enzymes [BR:
ido01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
I598_0143 (fpg1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
I598_0143 (fpg1)
DNA repair and recombination proteins [BR:
ido03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
I598_0143 (fpg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
OrfB_Zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
ANC29736
UniProt:
A0A168E8P9
LinkDB
All DBs
Position
154878..155810
Genome browser
AA seq
310 aa
AA seq
DB search
MPELPEVETVRAGLDRLVVGAVVRDVEVFREYSVRRHAGGPAGFADQLRGVRVTGAARRG
KYLWLPVAPAGGGEPAAALLAHLGMSGQLLVRDPAVAGEWEHPHLRVRLHLSGAPSGARY
LDFVDQRTFGHLSVTDLAPTPDGAPGGHGSPLTAVPEPVAHIARDLLDPALDRDAAVERV
RRRRTGIKRALLDQTVVSGVGNIYADEALWRARVHFARATDTMTRPVVRRVLDAATEVMT
ESLAQGGTSFDDLYVNVNGESGYFSRSLAAYGRAGEPCPRCGTPVRRDEFMNRSSFTCPR
CQPRPRQGRW
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagctccccgaggtcgagaccgtccgtgccggtctcgaccggctcgtcgtcggt
gcggtggtgcgcgacgtcgaggtgttccgcgagtactcggtgcggcggcacgcgggtggc
cccgccgggttcgccgaccagctccgcggcgtccgcgtcacgggtgccgcgcggcgcggc
aagtacctgtggctgccggtggcgcccgcgggcggcggcgagcccgcggccgcgctgctg
gcgcacctgggcatgtcgggccagctcctggtccgcgacccggccgtcgcgggggagtgg
gagcacccgcacctgcgggtgcgcctccacctctccggcgcgccgtccggcgcgcggtac
ctcgacttcgtcgaccagaggacgttcggccacctgtcggtgaccgacctcgcgcccacg
cccgacggcgcccccggcggtcacggctccccgctcacggcggtgccggagcccgtggcg
cacatcgcccgtgacctgctcgacccggcgctcgaccgggacgccgccgtggaacgggtc
cgccgccgtcggaccgggatcaagcgcgccctgctcgaccagaccgtggtgtccggcgtc
gggaacatctacgccgacgaggcgctctggcgggcccgggtgcacttcgcgcgggccacg
gacaccatgacccgtccggtggtgcggcgcgtgctcgacgccgcgaccgaggtcatgacg
gagtccctcgcccagggcggcacgagcttcgacgacctctacgtcaacgtcaacggcgag
tccggctacttctcgcggtcgctcgccgcctacggccgggcgggggagccgtgcccgcgg
tgcggcacgcccgtgcggcgcgacgagttcatgaaccgctcgtccttcacgtgcccccgc
tgccagccgcgtccgcgacagggccgctggtag
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