Idiomarina sp. OT37-5b: C5610_10170
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Entry
C5610_10170 CDS
T05379
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
idt
Idiomarina sp. OT37-5b
Pathway
idt02020
Two-component system
idt02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
idt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C5610_10170
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C5610_10170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
idt03000
]
C5610_10170
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
idt02035
]
C5610_10170
Transcription factors [BR:
idt03000
]
Prokaryotic type
Helix-turn-helix
Other families
C5610_10170
Bacterial motility proteins [BR:
idt02035
]
Flagellar system
Flagellar assembly proteins
Others
C5610_10170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
FleQ
HTH_8
AAA_5
AAA_16
bpMoxR
Mg_chelatase
HTH_50
AAA
TIP49
Motif
Other DBs
NCBI-ProteinID:
AVJ57379
UniProt:
A0A2S0IPF6
LinkDB
All DBs
Position
complement(2147974..2149407)
Genome browser
AA seq
477 aa
AA seq
DB search
MNNAKVVYLCEQDNNRRERFKTILTFVGEKVATIASVDELDGADDVLCVIAGTGVSDLDH
HARALPAIPFISACDSHQPALTRANVIGPIDSDVDYQELSRWLHYCHTYHRNLAQHHGSH
NHKTGQLETMLVGQGPAIQTIRRMIAQVAGSDANVLVLGESGTGKEVVARGIHVMSKRKD
GPFVPVNCGAIPGDLLESELFGHEKGAFTGAIGTRKGRFELAQGGTLFLDEIGDMPLAMQ
VKLLRVLQERTFERVGGSKSLKADVRVVAATHRKLETMIEEGKFREDLYYRLNVFPIEVP
ALRERQEDVPMLLRELTARFRKERGVGVRFSDKALESLSLHRWPGNVRELTNLIERLTIM
HPDQLVDVQDLPPKYQHIDQPDVTPEYPDELLERDALNSIFADDDDDDLDEQMMDANVNT
SLPDDGVNLKDMLSELEIAMIEQALDKTDGVVAKAADLLSMRRTTLVEKMKKYQIKQ
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgccaaagtcgtttacttatgtgagcaggacaacaaccgacgcgaacgcttt
aaaaccattttaacattcgttggcgaaaaggttgcgaccatcgcgtcggtcgatgaactt
gacggggcggacgatgtactctgtgtgatcgccggtacgggagtcagtgatctcgatcac
cacgcccgtgcgttgccggctatcccgtttatttctgcatgtgattcacaccagcccgca
ctgacaagagccaacgttattggcccgattgacagcgacgttgactaccaggaactgtcg
cgctggctgcattactgtcatacctaccatcgtaatctggcgcagcaccacggctcgcat
aatcataaaaccggtcagctcgagacgatgttggttggtcaggggccggcgatacaaacc
attcgccgtatgatcgcacaagttgcgggcagcgacgctaatgtattggtgcttggcgaa
tcaggaaccggtaaagaagtggttgcccgcggcattcacgtaatgtccaagcgtaaagat
ggaccttttgtgcccgtcaattgtggggctatccccggtgatttgctcgaaagcgagctg
tttggtcacgaaaaaggtgcctttaccggtgccatcggaacgcgcaaaggccgctttgag
ttagctcagggaggcacgctgtttctcgacgaaatcggtgatatgccactggcgatgcaa
gttaagctattacgggtattgcaggaacggacgttcgagcgggttggcggtagcaaaagc
ctgaaggccgatgtgcgcgtggttgcggcaacgcaccgtaagcttgaaacgatgatcgaa
gaaggcaagtttcgtgaggatctgtattaccgactgaacgtttttccgattgaagtgccg
gcgttgcgcgagcggcaggaagacgtaccgatgttgttaagagaactcacggcgcgattc
agaaaggagcgtggcgtcggtgtccgcttttccgacaaggcgttggagtcactgtcgttg
catcgctggccaggcaatgtgcgggagctaaccaatctgattgaacgattgaccataatg
catccggatcagttggtggatgtgcaggatttaccgcctaaataccaacatatagaccag
cctgacgtgacgccggaataccctgatgagttgcttgaacgcgacgcactcaattcgatt
tttgccgatgatgacgatgatgatctggatgaacagatgatggatgccaacgttaatacg
tcattgccggacgacggcgtcaacctgaaggatatgttgagtgaactggaaattgccatg
attgagcaggcgctggataagaccgacggggtcgtggcgaaagcagcggatctgttgagt
atgcgccgtaccacgctggttgaaaaaatgaagaaataccagataaagcaatag
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