Ignicoccus hospitalis: Igni_0850
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Entry
Igni_0850 CDS
T00587
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
iho
Ignicoccus hospitalis
Brite
KEGG Orthology (KO) [BR:
iho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
iho03016
]
Igni_0850
Enzymes [BR:
iho01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Igni_0850
Transfer RNA biogenesis [BR:
iho03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Igni_0850
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Paralog
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ABU82032
UniProt:
A8AAT0
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All DBs
Position
complement(754867..755424)
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AA seq
185 aa
AA seq
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MLRAFIAVDIEGELSEKLARLAESLKSTGADVKLVEKENFHITIRFLGNVPEESIDVIEK
IMRDAVREVKPHKLKLRGVGAFPSPERPRVVWVGVEGDEELRKIFERIERELRRLGFKPE
TKGFTAHVTLARVRSGRGREALVKWINDMKDVELGELEVKSIRLKKSTLTPRGPIYETLR
EVELA
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
gtgctgagggccttcatagcggtggacatagagggggaattgagcgagaagctagccagg
ctcgcggagtccttaaagagcacgggagctgacgtgaagctcgtagaaaaggagaacttc
cacatcactataaggttcttgggcaacgtacccgaggagagcatagatgtaatagaaaag
ataatgagagacgcagtaagagaggttaagccgcacaagctcaagctcaggggagttggg
gccttccccagccccgagaggccgagggtcgtgtgggtcggggttgagggagatgaggag
ctgaggaagatattcgaaaggatagaaagggagctgaggaggttgggctttaagcccgag
accaaaggctttaccgcccacgtgaccttagctagggttaggagcgggaggggtagggaa
gctctggtgaagtggattaacgacatgaaggacgtagagctaggagagctcgaggtaaag
agcataaggctgaagaagagtaccttgacgcctaggggaccaatttacgagacgttgaga
gaggtagagctggcttga
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