Idiomarina loihiensis L2TR: IL1017
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Entry
IL1017 CDS
T00218
Symbol
truA
Name
(GenBank) Pseudouridylate synthase (tRNA psi55)
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ilo
Idiomarina loihiensis L2TR
Brite
KEGG Orthology (KO) [BR:
ilo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ilo03016
]
IL1017 (truA)
Enzymes [BR:
ilo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
IL1017 (truA)
Transfer RNA biogenesis [BR:
ilo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IL1017 (truA)
Prokaryotic type
IL1017 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AAV81857
UniProt:
Q5QUE5
LinkDB
All DBs
Position
complement(1086520..1087305)
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AA seq
261 aa
AA seq
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MRMALCLEYDGSRYYGWQRQREVASVQQCVEEALSKIANAPVEVTCAGRTDAGVHATAQI
VHFDVPVPRADVAWTLGVNSNLPAGIAVRWAREVDSEFSARFSATSRRYRYIIANTRFRP
GIHSAGVSHYHQPLDAEVMQEAAQALVGEHDFTAFRASHCQSHTPFRKVSDLTVERRGDY
IIVDISANAFLHHMVRNIVGSLIVVGQHLQPPDWIGELLRQKDRTKAAATAKPGGLYLVA
VTYPEHYNIPDAPLGPLWLGD
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatggccttatgccttgaatacgacggcagtcgttattatggatggcaacgacaa
cgtgaagtagccagtgttcagcagtgtgttgaagaggctttgagtaaaatagcgaatgcg
cctgttgaggtaacttgtgccggcagaacggatgctggtgttcatgctaccgcacagatc
gtgcattttgatgtcccggtaccaagagctgatgttgcctggacgttaggagtgaacagt
aatctgcccgctggtattgctgtacgctgggcgcgggaagttgacagtgagttcagtgcg
cggtttagcgctacgtcgcgacgttaccgttatattattgccaataccagattccgtccg
gggatccattcggcaggggtcagtcattatcatcaaccacttgacgctgaagttatgcaa
gaagctgctcaggcgcttgtcggtgaacatgactttactgcattccgggcatctcattgc
cagtcgcataccccgtttcgtaaggtttccgatttaacggttgaacgccgtggcgactat
attatcgtggatatttcggcgaatgcctttttgcatcacatggtgcgaaatatcgtcggc
agtttgatcgttgttggtcagcacctgcagccaccggactggattggagaattgttaaga
cagaaagaccgcaccaaggctgcagctacagcgaaacccggcggactttacctggtggca
gtaacttacccggaacactataatatacccgatgctccactgggacctttgtggctaggc
gattaa
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