Ipomoea nil (Japanese morning glory): 109171543
Help
Entry
109171543 CDS
T04663
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03015
mRNA surveillance pathway
ini03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109171543
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
109171543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109171543
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
109171543
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
109171543
NCBI-ProteinID:
XP_019176127
LinkDB
All DBs
Position
Un
AA seq
638 aa
AA seq
DB search
MDPTADDQLDFDDEEYGGSQKMQYNGGGTIPALAEEEMMGEDDEYDDLYNDVNVGEGFLQ
LQRSEAPKPPDTVGNGGSQAPENSMSEPRAGAITSQEMNPGVASSGLRFPEQKSGLTTER
GPNQAADAPEKARPPSMTRDPQVGNMGFQGSVPMSHRTGSDPADISGNAVSESMPLQNSA
AGGSRGAPLMPAHQMNSNANINMNSPMMNENQMRPAIENGNTMLFVGELHWWTTDADIES
VLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAAAACKEGMNGHLFNGRACVVAFASP
QTIKQMGVSYMNKTQNQVQAQPRRPMNEGLNRGSGTSFPSGDQGRNFGRGGWGRGGQGMP
NRGPGGGPARGRGAMGAKNMVGNVPGANASMSGGAYGQGIAGPGFGGPPGLMHPQGMMGP
GFDPGYMGRGAGYGGFSGPGFPGMLPPFPAVNPMGLAGVAPHVNPAFFGRGMAANGMGMM
GTTGMDGPHPGMWTDTSTGGWGGEEHERRTRESSYGGEDNASEYGYGEASHDKGARSTAA
SREKERASERDWSGNSEKRHRDDREYERDRYDREHRYRDERDGYRDYRHKEREVDYEDDY
DRGHSSRSRSRSRAVQEEDHRSRSRDTDYGKRKRLPSE
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggatcctacagctgatgaccaattagattttgatgatgaggaatatggaggaagtcaa
aagatgcagtataatggaggtggaactatccctgcacttgcagaggaggaaatgatgggt
gaagatgatgaatatgatgatctttacaatgatgttaatgttggagagggttttcttcag
ctgcagcggtctgaagcaccaaaacctcctgatactgtgggaaatggaggatcccaagct
cccgaaaatagtatgtctgaaccaagagcgggtgctataacatcacaagagatgaaccct
ggtgttgccagttctggactgcgatttcctgagcaaaagagtggacttacaactgaaagg
ggtcccaatcaagctgctgatgccccagaaaaagcaagacctccttcaatgactcgtgat
cctcaagtgggaaacatgggatttcaaggatcagttccaatgtctcataggactggttct
gatccagctgatatttcaggcaatgctgtcagtgagtctatgccattgcagaattcagct
gctggtggctcaagaggtgctccattgatgccagctcatcaaatgaattctaatgccaat
attaacatgaacagccctatgatgaatgagaaccagatgaggccagccatagaaaatggc
aatacaatgctctttgtgggggagttgcactggtggactactgatgctgatattgagagt
gtgctaattcagtatgggaaagttaaggagattaaattttttgatgaaagagctagtggt
aaatccaaaggctattgtcaagtcgaattttatgatccttctgctgctgctgcttgtaaa
gaaggaatgaatggccaccttttcaatgggcgagcttgtgtggttgcatttgctagtcct
cagacaataaagcagatgggtgtttcttatatgaacaaaacccaaaatcaagttcaggct
cagccaaggaggcccatgaatgaaggactgaacagaggtagtgggacaagtttccccagt
ggagatcaagggaggaattttggtaggggtggctggggacgaggaggacagggaatgcca
aacagaggtcctggtggcgggcctgcaaggggaagaggtgctatgggagcaaagaatatg
gtaggtaatgtacctggagccaatgccagtatgagtggtggagcttatggacaaggcatt
gcaggtcctggttttggtggtcctccaggtcttatgcatcctcagggcatgatgggtcct
ggatttgatcctggttatatgggtcgaggagctggttatggaggcttttcaggccctggt
ttcccagggatgcttcctccgtttcctgctgtcaatccaatggggcttgctggagtggct
cctcatgtcaatcccgccttctttggccgtgggatggctgccaatggaatggggatgatg
gggacgacagggatggatggtcctcatccaggaatgtggactgatacaagcactggtggg
tggggaggggaagagcatgaaagaaggaccagggagtcaagttatggtggtgaggataat
gcatctgaatatgggtacggagaggccagccatgacaaaggagcaaggtcgacagctgct
tccagggagaaggagcgagcttcagaacgtgactggtcaggtaactctgagaagaggcat
cgggatgatagagagtatgaaagggacaggtatgatagggagcacaggtacagggatgag
agagatggttatagggactaccgtcacaaagaacgtgaggtagattatgaagatgactat
gataggggacattcttcaagatctcgaagcagatccagagcagtgcaggaagaggatcat
cgatctcgttcgagggatactgactatgggaagcggaaaaggttgccatcagagtaa
DBGET
integrated database retrieval system
