Ipomoea nil (Japanese morning glory): 109187181
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Entry
109187181 CDS
T04663
Name
(RefSeq) protein transport protein SEC13 homolog B-like
KO
K14004
protein transport protein SEC13
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03013
Nucleocytoplasmic transport
ini04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109187181
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109187181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109187181
04131 Membrane trafficking [BR:
ini04131
]
109187181
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109187181
Membrane trafficking [BR:
ini04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
109187181
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
109187181
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
109187181
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
WD40_2
Motif
Other DBs
NCBI-GeneID:
109187181
NCBI-ProteinID:
XP_019192847
LinkDB
All DBs
Position
Un
AA seq
302 aa
AA seq
DB search
MPAQKIETGHSDTVHDVSMDYYGKRVATASSDASIKIIGVSNNSTSQHLATLAGHHGPVW
QVSWAHPKFGSLLASCSFDGKVIVWKEGNQNEWTQAHVFNDHKSSVNSISWAPHELGLCL
ACGSSDGNISVYTARSDGGWDTARIDQAHPIGVTAVSWAPSMAPGALVGSGLHDPVQKLA
SAGCDNTVKVWKLYNGVWKMDCFPALQMHTNWVRDVAWAPNLGLPKSTIASASEDGKVVI
WTVAKEGDQWEGKVLYDFNTPVWRVSWSLTGNLLAVASGDNNVTLWNEAVDGEWQQVTTV
DQ
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcacagaaaattgaaacagggcacagtgacacagttcacgatgtgtctatggat
tactatggaaaacgtgtggcgacagcttcatctgatgcctccatcaagataattggtgtg
agcaacaactctacttcacagcaccttgctactctggccggtcatcatggtccagtttgg
caggtttcatgggcacaccctaaatttggttcactactggcttcctgttcatttgatggt
aaagtcattgtttggaaggaagggaatcaaaatgagtggacacaagctcatgttttcaat
gatcacaaatcttcagttaattctatttcgtgggctcctcatgaacttgggctttgcttg
gcatgtggatcatctgatgggaacatctctgtttacaccgcgaggtcagatggtggttgg
gacactgcaagaatagaccaggcccatcctattggagtaactgcagtttcatgggcacct
tcaatggctcccggtgctttagttggttctggtttacatgaccctgttcagaagcttgca
tcagctgggtgtgataacactgtgaaggtgtggaagctttataatggtgtttggaagatg
gattgcttccctgcccttcagatgcacactaactgggtgagggatgttgcgtgggcaccc
aatttggggcttccaaaatcaacaattgcaagtgcttcagaggatggtaaagttgtgata
tggactgtggcaaaagaaggagatcagtgggaaggaaaggttttgtatgactttaacaca
cccgtttggagggtctcatggtctttgactggaaacctgttagccgtagcttctggggac
aacaatgtcacactatggaatgaagcagttgacggggagtggcaacaggtcacaactgtt
gaccaatag
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