Ipomoea nil (Japanese morning glory): 109191881
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Entry
109191881 CDS
T04663
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1-like
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109191881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ini03021
]
109191881
Enzymes [BR:
ini01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109191881
Transcription machinery [BR:
ini03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
109191881
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
zinc_ribbon_10
Motif
Other DBs
NCBI-GeneID:
109191881
NCBI-ProteinID:
XP_019198098
LinkDB
All DBs
Position
Un
AA seq
1410 aa
AA seq
DB search
MMMRKREEMQFTKQPYIEDVGPRKIKSIQFSTFSSSEVMKSAEVEVYRGVYYDASKNPIP
NGLLDPRMGPPNKTKSCATCNGDFKECPGHYGYLNLALPVFNVGYLPIIIDILKCICKGC
SRILLGEKERLDFLRKMRNTKLEHLKKNELFKRVVKRCTAMTSGRKAVICSRCGCVNGMV
KKGPLKIIHEYGSQFLDECHNAVSNKVKGSITVPPELDSKTVHALFKKMIDEDCELLYLS
DKPEKLLVTSIPVPPIAIRPSVFVDGGMQRYVWLKCNCVHYSGFGLCCSNENDITERLKR
IIQANSSLRQEISDTTLPARSLASWVDLQMEVAQYINSDVRGLPPQMQASRPLSGFVQRL
KGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMARILTFPERVSRHNIEKLR
QCVRNGPNKYPGAKYIKHPDGTEISLMYSSRKRHADELKYGYIVDRHLEDGDAVLFNRQP
SLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTVEARTEALLLMGVQ
NNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRASFSLMCSYMGDAMDHIDLPTPALI
KPVELWTGKQLFGVLLRPYSKMRVYLTLTLKEKCYPKKGDLETMCPSDGFVYFRNSELIS
GQLGKATLGNGNKDGLYSVLLRDYNTHGAAICMNRLAKLSARWIGNHGFSIGIDDVQPRK
ELVEKKTMEIEKGYGTCETYIASFNKGELELQPGCDAAQTLEANITKELNGIRVKTGRVC
TDTLHWRNSPLIMYQCGSKGSDLNISQMVACVGQQSVGGCRAPNGFMDRSLPHFPIKSKF
PAAKGFVASSFYDGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSILYD
RTVRNASSCIVQFEYGDDGMDPAQMEEKKGHPLNFNRLFMKVKATCPPGEEKSLSSSEIQ
QVMHKRLSEHDMTPDGGCSNAFCKSLEEFIENNCVASLEKTRKDLKLDGEHNAGEDLDAL
ESITLNISGVTRKQLQVFLETCISRYHAKKLEDGTSIGAIGAQSIGEPGTQMTLKTFHFA
GVASMNVTLGVPRIKEIINGAKKISTPIIKAKLSCDDNVAFGRMVKGRIEKTLLGQVAKS
IKIVMAARVASIVIVLDKEAIQTSFLSIDAYIVKESILQTKKMKLKEQHIKVLDPRKLEV
IPHVDRSKLHFELHRLKNKLPGVVVKGIDTVERAVINKKEKGKNAGKYNLLVEGTGLLAV
MGTAGVYGYNTKSNHIMEVNQVLGIEAARNRIIKEIRYTMSSHGMTIDLRHMMLLADLMT
SKGEVLGITRFGIQKMKDSVLTLASFEKTADHLFNASVSGRDDKIEGVGECIIMGIPMQM
GTGMFKVMQSNTSHPVELNYGKESIIPRDD
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgaggaaaagagaagaaatgcagttcaccaagcagccttatattgaagatgtg
ggccctcggaaaataaaaagtattcagttttcaactttttctagttctgaagtaatgaaa
tcagctgaagtggaagtctatcgtggagtttactatgatgcttccaagaatcctattccc
aatggcctattagaccctcgcatgggccctccaaacaagaccaaatcttgtgccacatgc
aatggagatttcaaagaatgtcctggtcactatggatacttgaatcttgctttaccagtt
tttaatgttggatatctacccatcattatcgacatcttgaaatgcatttgcaagggttgt
tcccgcattcttcttggtgaaaaagaacgtctagacttcctaagaaagatgagaaataca
aagttggagcatttgaaaaagaatgagttgttcaaaagagttgtgaaaaggtgcactgcc
atgacaagtggtcgcaaggcagtgatttgttccagatgtggatgcgtaaatggaatggtg
aaaaagggtcctttgaagatcatccatgaatatggaagtcagtttttagatgagtgccat
aatgctgtttctaacaaagtcaagggatctattactgtgcctccagaacttgactcgaag
acagttcacgccctcttcaagaaaatgatagatgaggactgtgagttgctttatcttagt
gacaaaccagaaaaactccttgtcacaagtatccctgtgccaccaatagcaatacgccct
tctgtctttgtggatggtggaatgcagaggtatgtctggctcaagtgtaattgtgtgcat
tattcaggatttggcctttgttgcagtaatgagaatgacatcacagagaggctgaagcgc
attatccaagcaaattcaagtcttcgacaagaaatttccgatacaactcttccagctaga
agtctggctagctgggttgatctccaaatggaagttgcacagtacataaatagtgatgta
cgtggattgccaccacaaatgcaagcttccaggccactgagtggctttgttcagcgcctc
aaaggaaagcaaggtcgtttccgtggaaatctgtcaggcaagcgtgttgaatatactgga
cgcactgttatttcacctgatccaaatcttaaaatcactgaggtagcaattcctatctta
atggctcgaattttaacatttcctgagcgtgtttcacgacacaacatagagaagttgagg
caatgtgttcgcaatgggcccaacaaataccctggtgcgaagtatatcaagcatcctgat
ggtaccgagatttcgttaatgtactctagtagaaagcgtcatgctgatgaattgaaatat
ggctacatagttgatcgtcatttggaagatggagatgctgttctatttaatagacaacca
agtttacatcgaatgtctatcatgtgccatcgggcaaggattatgccatggcgcacattg
agatttaatgaatctgtttgcaatccctacaatgctgattttgatggtgatgagatgaat
atgcatgtaccacaaacagtagaggctcgcacagaggctcttttgttgatgggggtccaa
aacaatttatgcaccccaaagaatggagaaatcttggttgcttctacacaggattttcta
acatcttcatttctcattacaaggaaggacacattttatgatcgtgcttcgttttcactt
atgtgttcatacatgggcgatgcgatggatcacattgatttgccaactccagctttaatt
aagccagttgagctttggactggaaaacagttatttggtgtgcttctacgtccatatagt
aaaatgagagtctacttaacccttactcttaaggagaagtgttacccgaaaaaaggagat
ctagaaacaatgtgcccaagtgatgggtttgtttacttccgcaacagtgagctgataagt
gggcaacttggaaaggccacactaggaaatggaaacaaggatggactttattctgtgctg
ctaagggactataacacacatggtgctgcaatatgtatgaatcggcttgcaaagttgagt
gctcgttggatagggaatcatggattttcaattggcatagatgatgtgcaaccaagaaag
gagttagttgaaaagaagacaatggaaatagagaaggggtatgggacatgtgaaacgtat
atagcttcatttaacaagggggaacttgagctacaacctggatgtgatgctgcacagaca
cttgaagccaatataacaaaggaactgaatggtatccgagtgaaaactgggcgagtgtgc
actgatacactacattggaggaatagccccttaattatgtatcaatgtggttcaaaaggc
tcagatctcaatattagtcagatggttgcatgtgtcggccagcaatctgttgggggttgt
cgtgctccaaatggattcatggatcggagtcttcctcattttcctataaaatcaaaattt
ccagcggctaaaggattcgtcgccagttcattttatgatggtttaagtgctactgagttt
tttttccacactatgggtggaagagaaggccttgtagacacagcggttaaaactgctgac
acagggtatatgtctcggaggcttatgaaggctctggaggatctttcaattttgtacgac
agaaccgtgcgaaatgcaagttcatgcatagtacaatttgagtatggtgatgatggtatg
gaccctgcacagatggaagagaaaaaagggcatcctctgaactttaatagattatttatg
aaagttaaggcaacatgtcctcccggagaggaaaagagtctgtcatcatcagaaatccaa
caggtgatgcataaaaggctttcagaacatgatatgactccagatggggggtgctcaaat
gccttctgcaaatcattagaagaattcattgaaaacaactgtgtagcaagcttagagaaa
acacggaaagatctgaaacttgatggggaacataatgcaggggaggatcttgatgctctt
gaaagtatcactttaaatatatcaggtgtaacaagaaagcaactacaggttttcctagag
acctgcatctctcgttatcatgcaaagaaattggaagacggaacttcaatcggtgcaata
ggagctcagagtattggagaaccagggacgcagatgacattaaaaactttccactttgct
ggtgttgcaagcatgaatgttacacttggtgttcctcgcataaaagaaattataaatgga
gccaaaaagatcagcacacctattattaaagcaaaactttcatgtgatgataatgtagct
tttggtagaatggtaaagggtcgtatcgaaaaaactcttcttggtcaggttgccaagagt
attaagatagtgatggctgcgagagtagcatccatagttatagtgcttgataaggaagca
attcaaacttcatttctttccatagatgcttatattgttaaggaatcaattttgcagact
aaaaaaatgaagttgaaggaacagcacatcaaggttttagatcctagaaagctggaagtt
atccctcatgttgatcgaagtaaacttcattttgaactccaccgtctcaaaaataagctt
cctggggttgttgtgaagggtatcgacactgttgaacgtgctgtgatcaacaaaaaagaa
aagggaaagaatgcggggaagtacaacttgcttgtggaagggactggtcttctagctgtt
atgggcacagctggagtttatggatataacacaaaaagcaatcacatcatggaagtgaat
caagtacttggaattgaagccgcaagaaatcgtataattaaagagattaggtataccatg
tcaagccatggaatgactatagatttacgtcacatgatgcttctagcagatctaatgact
tctaagggtgaagtattaggaattactagatttggtattcagaagatgaaagacagtgta
ttgacattagcctcctttgagaagactgctgatcaccttttcaatgcttctgtaagtggg
cgggacgacaaaattgaaggagtcggtgaatgcatcattatgggcataccaatgcagatg
ggcacggggatgtttaaagttatgcaaagcaacacttctcatccagttgagctgaattat
ggaaaagaatcaattatccccagagacgactag
DBGET
integrated database retrieval system
