Iodobacter ciconiae: EJO50_04815
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Entry
EJO50_04815 CDS
T05767
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
iod
Iodobacter ciconiae
Pathway
iod03030
DNA replication
iod03430
Mismatch repair
iod03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
iod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EJO50_04815
03430 Mismatch repair
EJO50_04815
03440 Homologous recombination
EJO50_04815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
iod03032
]
EJO50_04815
03400 DNA repair and recombination proteins [BR:
iod03400
]
EJO50_04815
Enzymes [BR:
iod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EJO50_04815
DNA replication proteins [BR:
iod03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EJO50_04815
DNA repair and recombination proteins [BR:
iod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EJO50_04815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
RuvB_N
AAA_16
AAA_5
AAA_22
AAA_30
AAA_14
ResIII
AAA_19
PIF1
TsaE
AAA_18
AAA_7
Mg_chelatase
AAA_24
nSTAND3
Rad17
DUF815
AAA_assoc_2
DUF3646
Herpes_Helicase
SKI
NTPase_1
AAA_28
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
AZN35863
UniProt:
A0A3S8ZQV4
LinkDB
All DBs
Position
complement(1088988..1090685)
Genome browser
AA seq
565 aa
AA seq
DB search
MAYQVLARKWRPKSFAQLVGQEHVIKALANAFANDRLHHAYLLTGTRGVGKTTIARIMAK
ALNCETGITSTPCGVCSACTQIDAGRFVDLLEIDAASNTGIDNIREVLDNAQYSPTAGRF
KVYIIDEVHMLSKSAFNAMLKTLEEPPAHVKFILATTDPQKVPITVLSRCLQFSLRQMTP
QQVCGHLTQVLQAEEISFEQSALNVIGHAANGSMRDALSLLDQAIAYGGGDVGELAVRAM
LGAVDQSYLFDILQALIAGDGNAVLAATDAIAGRGLSYESALHELAHLLHQVAVAQAVPK
ALADDLPQRAQIAELAQAMSPEDTQLYYQIALHGRRDLPLAPDEYAGFSMTLLRMLAFSP
AEASQINLPLPAHPVATPAPAVAPQAAPVPNPPVQQQAAPRPPISEEPSHYDAPPWHEEE
PAAPPAPAPAAISEPVTSSPFNGDWRALILQLKLGAAGMLAQNAELLGYTANSIELLVGE
EHTAVASRAYQEKLREALSNHFGHDISLTITLGSASGDTPAAIALREKMARLAEATQSIQ
NDPFVQSVVRDFGATVIPDSIKPLS
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggcttatcaagtactggcacgcaaatggcggcctaaatcattcgcccaacttgttggg
caagaacatgtgatcaaagcgctggcaaatgccttcgcaaatgatcgtttacaccatgcc
tatctgctgaccggcacacgcggagtgggtaagaccaccatcgcgcggattatggcaaaa
gcgctgaattgtgaaacaggcattacgtccacgccgtgcggtgtgtgctcggcctgcacg
cagattgacgcggggcgctttgttgatcttttagagatcgacgcagcatcaaacaccggc
atcgacaatattcgcgaagtactcgacaacgcacagtactcgccgaccgccgggcggttc
aaagtgtacatcattgacgaagtacacatgctgtcaaaaagtgcttttaacgccatgctt
aaaacactggaagagccacctgcccacgttaaatttattctagccacaactgacccgcaa
aaagtaccgattacggtactaagccgatgcctgcagttttctttacgccaaatgacgccg
cagcaagtctgcggccatttaacacaggtattgcaagccgaagaaatcagctttgagcaa
agtgcactcaatgtgattggccatgctgccaatggctcaatgcgcgatgcgctcagtttg
cttgatcaggccattgcctatggcggtggtgatgtaggcgagctggccgtgcgcgccatg
ctgggcgcggtggatcagagttatcttttcgatattctgcaggcactgattgcaggcgat
ggcaatgctgtattagcagctaccgatgccattgcaggccgtggcttatcttacgaatcg
gccttgcacgaattagcacacttattacatcaggtagccgttgcacaggccgtgcctaaa
gctttggccgacgatttgccacaaagggcgcaaattgccgaactcgctcaggccatgagc
ccggaagacacgcagctgtattatcaaattgccctgcacggccgccgtgatctgccactt
gctccggatgaatacgcgggctttagcatgacgctattgcgaatgctggctttttctccg
gcagaagcaagccagattaatctgccattacccgcacatcctgttgcaacgcccgctccg
gcagtggccccacaagctgcacccgtacccaatccaccagtacagcaacaggctgcgccg
cgcccgcccatcagcgaggagccaagccattacgatgcgccgccctggcacgaggaagag
ccggctgctccacctgccccggcaccagcagccatttcagagccagtcacaagcagcccg
tttaatggcgactggcgagcgctgattctgcaactcaagctcggagccgcaggcatgctg
gcgcaaaatgctgaattactgggctataccgcaaactcgattgagctattagtaggcgaa
gagcatacagccgttgccagccgcgcctatcaggaaaagctgcgcgaagcactcagcaac
cactttggccatgatatttcgctaaccatcacccttggctcggccagcggcgacaccccg
gctgccattgccttaagagaaaaaatggcacgccttgccgaggcaacacaatccattcaa
aacgatccttttgtacaatccgtggtacgtgattttggtgccacggtcattcccgattca
atcaaaccactcagttaa
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