Ictalurus punctatus (channel catfish): 100305036
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Entry
100305036 CDS
T04658
Name
(RefSeq) heat shock cognate 71 kDa protein
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03040
Spliceosome
ipu04010
MAPK signaling pathway
ipu04141
Protein processing in endoplasmic reticulum
ipu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100305036
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100305036
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100305036
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100305036
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ipu01009
]
100305036
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
100305036
03009 Ribosome biogenesis [BR:
ipu03009
]
100305036
03110 Chaperones and folding catalysts [BR:
ipu03110
]
100305036
04131 Membrane trafficking [BR:
ipu04131
]
100305036
03051 Proteasome [BR:
ipu03051
]
100305036
03029 Mitochondrial biogenesis [BR:
ipu03029
]
100305036
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
100305036
Protein phosphatases and associated proteins [BR:
ipu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
100305036
Spliceosome [BR:
ipu03041
]
Complex B
Other components
Prp19 complex
100305036
Complex C
Prp19-CDC5 complex
100305036
Ribosome biogenesis [BR:
ipu03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
100305036
Chaperones and folding catalysts [BR:
ipu03110
]
Heat shock proteins
HSP70 / DNAK
100305036
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
100305036
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
100305036
Proteasome [BR:
ipu03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
100305036
Mitochondrial biogenesis [BR:
ipu03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
100305036
Exosome [BR:
ipu04147
]
Exosomal proteins
Proteins found in most exosomes
100305036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
100305036
NCBI-ProteinID:
NP_001187202
Ensembl:
ENSIPUG00000006424
UniProt:
P47773
LinkDB
All DBs
Position
16:complement(14993638..14999195)
Genome browser
AA seq
649 aa
AA seq
DB search
MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVA
MNPTNTIFDAKRLIGRRFEDSVVQADMKHWPFKVISDGGRPRLEVEYKGEAKNFYPEEIS
SMVLVKMKEIAEAYLGKSINNAVITVPAYFNDSQRQRTKDAGTISGLNVLRIINEPTAAA
IAYGLDKKVGSERNVLIFDLGGGTFDVSILTIEDGIFDLKSTAGDTHLGGEDFDNRMVNH
FIAEFKRKHKKDISDNKRAVRRLATACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRA
RFEELNADLFRGTLDPVEKALRDAKMDKAQVHDIVLVGGSTRIPKMEKLLQDFFNGKELN
KSINPDEAVAYGAAVQAESSLGDKSENVQDLVLLDVTPLSLGIETAGGVMTVLIKRNTTI
PTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDI
DANGIMNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKN
GLESYAFNMKSTVEDEKLKGKISDEDKHKILDKCNEVISWLDKNQTAEKDEYEHQQKDLE
KVCNPIITKLYQSDGGMPGGMPDGMPGGFQELGAAPGGGSSGPTIEEVD
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagggaccagctgttggcattgatctggggaccacctactcatgtgttggagtc
ttccagcatggcaaagttgaaatcattgccaatgaccaaggaaaccggaccacaccaagc
tatgtggccttcactgattctgaaaggttgattggtgatgcagccaagaaccaagtggcc
atgaaccccaccaacacaatctttgatgccaaacgtctgatcggcaggaggttcgaagat
tccgtggttcaggctgacatgaaacattggcctttcaaggtcatcagtgatggtggacgt
ccaaggttggaggtggaatacaaaggagaggccaagaacttctaccctgaggaaatctcc
tccatggttttggtgaagatgaaggaaattgctgaagcctaccttggaaagtctatcaat
aatgctgtgataacagtaccggcttacttcaacgactctcagcgtcaacgcacaaaagat
gctggaacgatctctggtctgaatgtactgcgaattattaatgagcctactgctgctgct
attgcctatgggttggacaagaaggttggttctgaaaggaacgtcctcatctttgatctt
ggtggtggcaccttcgatgtgtccatcctgactattgaagatggcatctttgacctcaaa
tccactgctggtgacactcatcttggtggtgaagatttcgacaaccgcatggtgaaccac
ttcattgctgagttcaaacgcaagcacaagaaggacatcagtgacaacaagagagctgtt
cgccgtctggccactgcctgtgagcgggccaagcgcaccctgtcctctagcactcaggcc
agcattgagattgactctctttatgagggtgttgatttctacacgtccatcacaagagct
cgctttgaggagctcaacgctgacctcttccgtggaaccctggaccctgtagaaaaggcg
ctcagagatgccaagatggacaaagctcaggtccacgacatagtcctggttggtggctct
acccgcatccccaagatggagaagctccttcaagatttcttcaatggcaaggagctcaat
aagagcatcaaccctgatgaggctgtggcttatggagcagctgtccaggccgaatcctct
ctgggggacaagtctgagaatgttcaggacctcgtgctgcttgatgttacccctctgtct
cttggaattgagactgctggtggtgtcatgactgtcctcatcaagcgcaacaccaccatt
ccaaccaagcagacccagactttcaccacctactctgacaaccagcctggtgtgctgatt
caggtttatgagggtgagcgtgccatgaccaaggacaacaacctgctgggcaaatttgag
ctcactggaatcccacctgctcctcgtggtgttccccagattgaggtcacatttgacatt
gatgctaatggtatcatgaatgtctctgctgttgacaagagcactggtaaagagaacaag
atcacaatcacgaacgacaagggccgtctcagcaaggaggacattgagcgcatggtgcag
gaggctgagaaatacaaggcggaggatgatgtgcagcgtgacaaggtgtctgccaagaat
ggcctggagtcctatgctttcaatatgaagtccactgtagaggatgagaagctgaagggt
aaaatcagtgacgaggataagcataagatcctggacaaatgcaatgaagtaatcagctgg
cttgacaaaaaccagactgctgagaaggatgagtatgagcaccaacagaaagacctggag
aaggtctgtaacccaatcatcaccaaactgtaccagagtgatggtggtatgcctggtggg
atgcccgatgggatgccaggtggctttcaggagctgggggctgctcctggtggtggatct
tctggtcccaccatcgaggaggttgattag
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