KEGG   Ictalurus punctatus (channel catfish): 108254769
Entry
108254769         CDS       T04658                                 
Symbol
kdm5ba
Name
(RefSeq) lysine (K)-specific demethylase 5Ba isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ipu01009]
    108254769 (kdm5ba)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ipu03036]
    108254769 (kdm5ba)
Enzymes [BR:ipu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     108254769 (kdm5ba)
Protein phosphatases and associated proteins [BR:ipu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     108254769 (kdm5ba)
Chromosome and associated proteins [BR:ipu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    108254769 (kdm5ba)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID PHD zf-C5HC2 JmjN zf-PHD-like
Other DBs
NCBI-GeneID: 108254769
NCBI-ProteinID: XP_017305549
Ensembl: ENSIPUG00000015005
UniProt: A0A2D0PI78
LinkDB
Position
21:complement(242350..275072)
AA seq 1476 aa
MTKPRPNEFIPPPECPVFEPSWEEFDDPFAFINKIRPIAEKTGICKIRPPQGWQPPFACD
VDRLHFTPRMQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHVERKSLDLYQLYKLV
VEEGSFDIVCRERKWTQIALKMGFAPGKAVGSHLRAHYERILYPYYLFQTGANLLNSQKP
TLKNDTKDKVYKSHDLPQRQSVQPAEIPTIARRAKRSKISLKGRCFKSVQEEECENRPNL
RRRMGSYVATLEAVKSFPVQVKQEPMEQVESIPHGEKSKVEQYMCLVCGGGGDEDKLLLC
DGCDDSYHIFCLIPPLHDVPKGDWRCPKCLAQECGKPQVAFGFEQAPRDYTLRSFGDMAD
SFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKDFGSGFPVRNGPFKV
RSDEEHYLSCGWNLNNMPVLDASVLTHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYS
INYLHWGEPKTWYGAPGFAAEQLEAVMKKLAPELFESQPDLLHQLVTIMNPNLLMEHGVP
VYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWMPLGRQCVEHYRSLNRYCVF
SHDEMVCNIAAKADSLELELASAIQRDMSVMIQEEKELRDKAYKLGVWHSQQVDYEERPD
EERQCSKCRTTCYLSAITCPCSPGQLVCLHHLQDFCSCTPNRYTLNYKYTLGMLNQMFNT
LAAHAESYSDWASKVNIILKADQDNKSDLEELRALIVEAEKMMYPEMDLLLYLRQTVQDA
EKSTLMAQQLLNGKRQTRYRSGGGKSQKHLTVEELRLFVQQLYDLPCTIRQAPFLKALLS
RVRQFQEQSSDLLAIEMPSSSALQAMLDEGSGLEVELPELDVLRQRLEQARWVEAVQQAS
KEPTSLSLERMRKLIDQGVGLEPHACVERTMAHLQELLTVCEHCEEKAHSMLMARPRQNL
ETLEAVLLEVNSIQAYLPNCLQLQDSVIRAREWIQEAEVLQLGGRIPVLSSLNDLVLKAK
GIPVLLEPLARLESLVSEVQAWKESAAKMFLLKYSSLSLLEVLCPRCETVCQKSKSKRVR
DVPPAGKKNGIKLSCLGDVERALYESKDTALAMATLCEVRLKELENLNILRTTNNAKFLP
TNSLAPTVCLCHTVPAGPMLQCELCHDAYHSGCVPGYQDTQAGQPWLCPLCSRSEKPPLD
KVLPLLASLQRIRVRLPEGDALRFMIERTVRWQHRVQQVSPFTQQFNGKMRPFSGKPSSV
SLDGSNECFYMHHSCIPLSVLSPELEELLVEGLLLQVALPELQQLYQGLLNRFFPSQHAL
QSSEHDHQYHIAQDSSLTYKSPAQGKVQDLVLELQKHTEKLEKTPKRQLEKETSDGQDRD
PVKKPKQKKSRTYQERTHEKRTLSSSGLSSVPPFSEDSEEDWSVCSAKRCQQPEGNEVNW
VQCDGNCNQWFHQICVGVSAEQAENEDYICINCLVK
NT seq 4431 nt   +upstreamnt  +downstreamnt
atgaccaagcctcgacccaacgagtttattccaccgccggaatgtccagtgtttgagccc
agttgggaagaattcgacgacccgtttgcgtttatcaacaaaatccgccccattgcagaa
aagactggtatttgtaagatcagaccgccgcaggggtggcaaccaccatttgcctgtgat
gtggaccgattgcatttcaccccacgcatgcagaggctcaatgaattggaggctcaaacc
agagtcaaactgaactttctggaccagatagctaagttttgggagctgcagggctgcaca
ttgaaaatccctcatgtggagcgcaaatctcttgacctgtatcaactctacaagttggtg
gtggaggaaggcagttttgacattgtctgcagggaacggaaatggacccagatcgctctg
aaaatgggctttgctcctggcaaggctgttggatctcacttacgtgcccactatgagagg
attctctacccttactacctgttccagacgggggccaaccttctgaactcacagaaaccc
actcttaaaaatgataccaaagataaggtatataaatctcatgacttgccccagcgacag
tctgtacagcctgcagaaatccccaccattgctcgcagagccaaacggtctaaaatctct
ttaaagggtcgctgtttcaaaagtgtgcaggaggaagagtgcgagaacagacccaacctg
agaaggagaatgggctcttatgtggcaacactagaagcagtgaaaagctttccagtccag
gtgaaacaggagcctatggaacaagttgaatcaatacctcatggagaaaaatctaaggtg
gaacaatacatgtgtttggtgtgtgggggaggcggtgatgaggacaagctgttgctgtgt
gacggttgcgatgacagctaccacatattctgtcttatcccaccactccatgatgtcccc
aaaggggactggagatgtcccaagtgcctggcgcaggagtgtggcaagcctcaggttgca
ttcggctttgaacaggcgcccagagattacacacttcgctccttcggagatatggcagac
tccttcaagtcagactatttcaacatgcctgtgcatatggtccctactgagctggttgag
aaggaattttggcgtttagttagcaccattgaagaagatgtcacagtagagtatggagcg
gacattgcctcaaaggactttggtagtggcttccctgtcaggaatggtccttttaaagtc
aggtccgatgaagagcattacctcagctgtggctggaacctgaacaacatgccagtgctg
gatgcatctgtgctgactcacatcacggctgacatatgtgggatgaagctgccctggctc
tacgtgggcatgtgcttctcctctttctgttggcatattgaggatcattggagctattct
ataaactatttgcactggggagagccaaagacctggtatggtgctcctggctttgcagca
gagcagttggaagcggttatgaagaaacttgcccctgagctctttgagtcccagccagat
ttgctccatcagttggttacaatcatgaaccccaatttgctaatggagcatggagtccct
gtttaccgcacaaaccagtgtgctggtgagtttgtcatcaccttccccagagcttatcac
agcgggttcaatcagggatttaactttgcagaggctgttaacttctgcacagtggactgg
atgcctcttggtcgacagtgtgtggagcattatcgctcattaaacagatactgtgttttc
tcccatgatgagatggtctgtaatattgcagccaaggcagacagcctggagctggagctg
gcctctgccatacagagagacatgagcgttatgattcaggaggagaaagagttgcgcgat
aaagcctacaagctgggtgtgtggcactcccagcaggtggactatgaagagcggcctgat
gaggagaggcagtgttctaaatgcaggaccacctgctacctatctgccatcacctgtccc
tgcagtcctggacagctggtgtgtctacaccacctccaggacttctgctcctgtacccct
aaccgttatacactgaattataagtacaccttgggcatgttgaaccaaatgttcaacact
ttggcagcacatgctgagtcatacagtgattgggcttctaaagttaatataattttaaag
gctgaccaagacaataaaagtgacttggaggaacttcgtgcactgattgtggaggcagaa
aagatgatgtatcctgagatggacttgctactctatttaagacagactgtccaggatgca
gaaaagagtaccttaatggcccagcagctactcaatggaaagagacagaccaggtatcgc
tcaggtggtgggaaatctcagaaacatcttactgtagaggagttgaggttatttgtacaa
cagctatatgatctgccctgcaccattagacaggctccttttctcaaggctcttctcagc
cgggtcaggcagttccaggaacagagctcagatctcctggccatagagatgcccagctcc
tcagccctgcaagctatgctggatgagggctctgggctggaggtagagttaccagagctt
gatgtgctcaggcagcgactggagcaggcacgctgggttgaggcagtacaacaggctagc
aaggagcctaccagcctcagcctggaacgcatgaggaaactgattgaccagggagtgggt
ctggagccccacgcctgtgtggagaggaccatggcccacctgcaagagctgctcactgtg
tgtgagcactgcgaggagaaggcacacagcatgctaatggccagacctcgccaaaattta
gagacgctggaggccgtgctgctggaagtaaatagtatccaggcgtacctgcccaactgt
ctccaactgcaagactcggtcatcagggctagagagtggatacaggaggcagaagtccta
cagcttggagggcgtatccctgttctctcatctttgaatgatctggttttaaaagctaaa
ggcatcccagtcctgctggagcctctggcacgactggaaagcctggtgtcagaggtgcag
gcatggaaggagagcgcagcaaaaatgtttttgttgaagtactcctccctctccctcctg
gaggtactgtgccccagatgtgagacagtgtgtcagaaatcaaagtcaaaaagagtgaga
gatgttcctcctgctggtaaaaaaaacggcataaaactgagttgtcttggtgatgtggaa
agagctctttatgaaagcaaagacacagctttagcaatggctactctgtgtgaggtgcgt
ttgaaggagctggagaacctaaatatcctaaggaccacaaacaatgcaaagtttctgccc
acaaacagcttggctcctacagtgtgcctatgccatacagtgccagcaggccccatgctc
cagtgcgaactctgccatgatgcttaccacagtggttgtgtgccagggtaccaagataca
caggcagggcagccttggctgtgcccactctgcagccgatctgagaaacctcctctggac
aaggtgctgcccctgcttgcctctctccagcgtattcgggtacggctcccagagggtgac
gcgctgcgttttatgattgagaggacagtgcgctggcagcacagggtgcaacaggtctca
ccttttacacagcaatttaatggaaaaatgagacctttctctggaaaaccttcttctgta
tccctggatgggagtaatgagtgcttctatatgcaccattcatgcattcctctcagtgtt
cttagtcctgaattagaggagctgcttgtggaaggactccttctacaggtggctttgcct
gagctgcagcagctctaccaggggttgctcaacaggttctttccctctcagcatgcccta
cagagcagcgagcatgaccaccagtaccacattgctcaggacagcagcctgacttacaaa
agcccagcccaaggcaaggtccaggatttagttttagagttgcaaaaacacactgagaag
ctagagaagactcccaaaaggcagttggagaaggagacctctgatgggcaggacagagac
cctgttaagaagcctaagcaaaagaagtctaggacataccaggagaggacgcatgagaaa
agaacactctcctcctctggtttgagctcagtcccacccttttcagaggactctgaggag
gactggtctgtgtgttcagctaagcgatgtcaacagccagagggaaatgaggtaaactgg
gttcagtgtgatggcaactgtaaccagtggttccaccaaatttgtgtgggtgtgtctgct
gagcaggctgagaatgaagactacatctgcatcaactgcttagtaaaatga

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