Ictalurus punctatus (channel catfish): 108257448
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Entry
108257448 CDS
T04658
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00310
Lysine degradation
ipu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
108257448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108257448
03036 Chromosome and associated proteins [BR:
ipu03036
]
108257448
Enzymes [BR:
ipu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
108257448
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
108257448
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
108257448
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
108257448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
SET
zf-C2H2_6
Zn_ribbon_SprT
zf-C2H2_11
zf-met
Zn-ribbon_8
zf_PR_Knuckle
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
108257448
NCBI-ProteinID:
XP_053531071
UniProt:
A0A9F7R6U9
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Position
24:2291829..2299127
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AA seq
525 aa
AA seq
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MSSAGDRQHSFRKSRAPDPAHSQLSEDVKRECLDEGTEVCVKKEEMLQLNIYNHGHAFNT
MPEVLPIKEEESDTEDFLYCEVCKSFFFNKCEVHGPALFIPDSPVPMGVVDRARQTLPPG
LEVRKSGIPDAGLGVFNMGETVPIGAHFGPYQGELVDREDAMNSSYSWVIYRSRQREEYI
DAKRETYANWMRYVNCAHNDEEQNLVAFQYRGEILYRCCRPIDPGQELLMWYEEEYPKDQ
GPTFAYLWNQKCSANEVDNSPVQVVSCSLCPRSYTSQLYFDKHMRRRHHEEYVRLQKSGE
IQMSTKGTSNQQASSATLSPNTFPKDIHHCSECGKSFTHPSSLQRHQRIHTGEKPYHCSE
CGKSFTEHSALQLHKRIHTGEKPYHCSECGKSFIHPSNLRKHQRIHTGEKPYYCLQCGKS
FTQQSNLQQHQHIHTGKKPYPCLHCERSFNRLDILRTHQSIHTGEKPYRCSQCGKGFDRQ
SNLKRHQSIHTGEQGEKPHQCSQCGKGFDHLDCLPKHQCIHTEKK
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgagttcagcaggagacagacagcactctttcagaaagtctcgggctcccgatccagct
cactcacagctgtctgaggatgtgaaaagagagtgtttagatgaagggacagaagtgtgt
gtgaagaaggaggagatgctgcagctgaacatctacaaccatggacacgccttcaacacc
atgcctgaagttctccccattaaagaggaagaatctgacaccgaagacttcctctactgt
gaggtctgcaaatcgttcttcttcaacaagtgtgaggttcacggtcctgcactcttcatc
cctgatagccctgttcccatgggggtcgttgaccgagccagacagactcttcctcctgga
ctagaggttcggaagtccggtattcctgatgcgggtctgggagtgtttaatatgggggag
actgttccaattggtgcacactttggaccgtaccagggagagctggtagaccgagaggat
gccatgaacagcagctactcttgggtgatatacaggagcaggcagcgtgaagaatacata
gatgctaagagagagacgtatgctaactggatgaggtatgtgaattgtgctcataatgat
gaagagcagaatcttgtggcgtttcagtatcgaggggaaattctgtaccgttgttgtcgg
cccatcgacccaggacaggagctcttgatgtggtatgaagaggaatatcccaaagatcag
ggccctacattcgcgtacctctggaaccaaaagtgctctgcaaatgaagtggataactct
ccggtacaagttgtctcctgctccttgtgtccacgttcctatacttctcaactttacttc
gacaaacacatgcggagacgccaccacgaggagtatgtgagacttcagaaatcaggagag
attcagatgtccacaaaaggcaccagtaatcagcaagcatcatctgctactctgagtcct
aacacatttccgaaagatattcaccactgctcagagtgtggaaagagttttactcatccg
agttctctacaacgacaccagcgtattcacacaggagagaagccttatcactgctcagag
tgtggaaagagttttactgaacacagtgcactacagctacacaagcgcattcacacagga
gagaagccatatcactgctcagagtgtggaaagagttttattcacccgagtaatctccga
aaacatcagcgtattcacacaggagagaaaccgtattattgtttacagtgtgggaagagt
tttacacaacagagtaatcttcaacaacaccagcatattcacacaggaaagaagccgtat
ccctgcttacattgtgagaggagttttaatcgcctggatattctcagaacacatcagagc
attcacacaggagagaagccctatcgatgctcacaatgtgggaagggttttgatcgccag
agtaatctcaaacgccaccagagcattcacacaggagagcaaggagagaagccccatcaa
tgctcacaatgtgggaagggttttgatcacctggattgtctgccaaaacatcagtgcatt
cacactgaaaaaaagtaa
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