Ictalurus punctatus (channel catfish): 108258694
Help
Entry
108258694 CDS
T04658
Name
(RefSeq) protein SGT1 homolog isoform X1
KO
K12795
suppressor of G2 allele of SKP1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
108258694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SGS
CS
TPR_2
TPR_1
SHQ1-like_CS
TPR_9
TPR_8
Phlebo_G2_C
DUF2018
BsuPI
ANAPC3
TPR_19
Motif
Other DBs
NCBI-GeneID:
108258694
NCBI-ProteinID:
XP_017312996
Ensembl:
ENSIPUG00000012837
UniProt:
A0A2D0Q5L8
LinkDB
All DBs
Position
26:9118762..9143245
Genome browser
AA seq
326 aa
AA seq
DB search
MASDKSFTDRFIDADPTRALEELNVALGETANNAEWLCQRAYAHILLKDYNRAVDDAKKA
LQLQPGMSLAFLRTGIAEYHLDNISAAHQAFTAGKGLEGANEDFQTWIKCCEEKMATQDR
NGTSNLQQTATPHVKRDWYQTESQVTVTLMVKNVKKEEVHITFKEKELKVMLKLPSGEDY
CLNIHLLHPVVPEQSTYKIFSTKVEIKMKKTEGIRWEKLEGESILPNLKHFSPSPNQYPS
SSHYTRNWDKLVGDIKEEEKTEKLEGDAALNKLFQQIYTDGSDEVKKAMNKSFMESGGTV
LSTNWTDVGKRKVDVNPPDDMEWKPY
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcgataagagttttactgaccgcttcatagacgcggacccaacgcgagcactt
gaggagctgaatgtggctttaggtgagacggctaataatgcagaatggctgtgtcagcga
gcatatgcgcacatcctgctcaaagactataacagagcagttgatgacgctaagaaagcc
ctgcagcttcagcctggtatgtcacttgcattcctgagaacaggaattgcagaatatcat
cttgacaacatcagtgctgcacaccaggctttcacagctggaaaaggacttgaaggtgct
aatgaagactttcaaacatggatcaagtgttgtgaagagaaaatggcaacacaagaccga
aatggaacctcaaatttgcagcaaactgcaactccacatgtcaaacgtgactggtaccag
acagaatctcaagttactgtcacactaatggtcaaaaatgtcaagaaggaagaagttcac
atcacatttaaggagaaggagttgaaagtaatgctgaaacttccatctggtgaggattac
tgcctaaatatccaccttctacaccctgtggttcctgagcagagcacatacaagatcttc
tccaccaaggttgagataaaaatgaagaagacagaaggcatccggtgggagaagctggaa
ggcgaaagcatccttccaaacttgaagcacttttctccctctccgaaccaatacccatca
tcctcccactatacccgcaactgggacaagttggtgggtgatattaaggaggaagagaag
actgagaagcttgaaggagatgcagcactgaacaagctgttccagcagatctacactgat
ggctcagatgaggtcaagaaggccatgaacaagtcctttatggaatcaggaggcacagtt
ctcagtactaactggacagacgtgggcaagcggaaagtagatgttaatccccctgatgat
atggaatggaagccatattga
DBGET
integrated database retrieval system