KEGG   Ictalurus punctatus (channel catfish): 108258694
Entry
108258694         CDS       T04658                                 
Name
(RefSeq) protein SGT1 homolog isoform X1
  KO
K12795  suppressor of G2 allele of SKP1
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    108258694
SSDB
Motif
Pfam: SGS CS TPR_2 TPR_1 SHQ1-like_CS TPR_9 TPR_8 Phlebo_G2_C DUF2018 BsuPI ANAPC3 TPR_19
Other DBs
NCBI-GeneID: 108258694
NCBI-ProteinID: XP_017312996
Ensembl: ENSIPUG00000012837
UniProt: A0A2D0Q5L8
LinkDB
Position
26:9118762..9143245
AA seq 326 aa
MASDKSFTDRFIDADPTRALEELNVALGETANNAEWLCQRAYAHILLKDYNRAVDDAKKA
LQLQPGMSLAFLRTGIAEYHLDNISAAHQAFTAGKGLEGANEDFQTWIKCCEEKMATQDR
NGTSNLQQTATPHVKRDWYQTESQVTVTLMVKNVKKEEVHITFKEKELKVMLKLPSGEDY
CLNIHLLHPVVPEQSTYKIFSTKVEIKMKKTEGIRWEKLEGESILPNLKHFSPSPNQYPS
SSHYTRNWDKLVGDIKEEEKTEKLEGDAALNKLFQQIYTDGSDEVKKAMNKSFMESGGTV
LSTNWTDVGKRKVDVNPPDDMEWKPY
NT seq 981 nt   +upstreamnt  +downstreamnt
atggcaagcgataagagttttactgaccgcttcatagacgcggacccaacgcgagcactt
gaggagctgaatgtggctttaggtgagacggctaataatgcagaatggctgtgtcagcga
gcatatgcgcacatcctgctcaaagactataacagagcagttgatgacgctaagaaagcc
ctgcagcttcagcctggtatgtcacttgcattcctgagaacaggaattgcagaatatcat
cttgacaacatcagtgctgcacaccaggctttcacagctggaaaaggacttgaaggtgct
aatgaagactttcaaacatggatcaagtgttgtgaagagaaaatggcaacacaagaccga
aatggaacctcaaatttgcagcaaactgcaactccacatgtcaaacgtgactggtaccag
acagaatctcaagttactgtcacactaatggtcaaaaatgtcaagaaggaagaagttcac
atcacatttaaggagaaggagttgaaagtaatgctgaaacttccatctggtgaggattac
tgcctaaatatccaccttctacaccctgtggttcctgagcagagcacatacaagatcttc
tccaccaaggttgagataaaaatgaagaagacagaaggcatccggtgggagaagctggaa
ggcgaaagcatccttccaaacttgaagcacttttctccctctccgaaccaatacccatca
tcctcccactatacccgcaactgggacaagttggtgggtgatattaaggaggaagagaag
actgagaagcttgaaggagatgcagcactgaacaagctgttccagcagatctacactgat
ggctcagatgaggtcaagaaggccatgaacaagtcctttatggaatcaggaggcacagtt
ctcagtactaactggacagacgtgggcaagcggaaagtagatgttaatccccctgatgat
atggaatggaagccatattga

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