Ictalurus punctatus (channel catfish): 108259333
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Entry
108259333 CDS
T04658
Symbol
ascl1b
Name
(RefSeq) achaete-scute homolog 1b
KO
K09067
achaete-scute complex protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108259333 (ascl1b)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Achaete-Scute
108259333 (ascl1b)
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GFIT
Motif
Pfam:
HLH
CBP_CCPA
Motif
Other DBs
NCBI-GeneID:
108259333
NCBI-ProteinID:
XP_017314216
Ensembl:
ENSIPUG00000022550
UniProt:
A0A2D0Q933
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Position
27:complement(9340386..9344081)
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AA seq
192 aa
AA seq
DB search
MYFTEMEITKTQISPCAYRLQISDSFAPLQKATSPRSPERALLKRQGCSSPERLRCTRRL
SFGALGLGVAQQQPVAVARRNERERNRVKQVNMGFQTLRQHVPNGAANKKMSKVETLRSA
VEYIRALQRLLDEHDAVSAAFRCGVPSPTVSSACSAGPESPRSACSSDESGYEHLNSEDQ
ELLDFAAWFNGF
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgtattttacggaaatggagatcacaaagacacaaataagtccttgcgcgtaccgttta
cagatttcggacagctttgctcctctacagaaagcgacaagtccgcgcagcccggagcgc
gcgctgctgaaaaggcagggttgcagcagcccggagcgcctgaggtgcacgcgcaggctg
agcttcggagctcttgggctcggggtcgctcagcagcagccagtggctgtggctaggcga
aacgagcgagagaggaacagggtgaaacaggtcaacatgggctttcagactctccgccag
cacgtgcccaacggcgcggccaacaagaagatgagcaaagtggagacgctgcgctcggct
gtggagtacatccgcgcgctccagcgacttttggacgagcacgacgccgtgtccgctgcg
ttccggtgcggagtcccgtctcccacggtctcgagcgcgtgctctgctggtccagagtcc
ccccgctccgcctgctcctctgacgagagcggatacgagcatctaaactcggaagaccag
gagctgctggacttcgccgcatggttcaacgggttctag
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