KEGG   Ictalurus punctatus (channel catfish): 108266106Help
Entry
108266106         CDS       T04658                                 

Gene name
setdb1
Definition
(RefSeq) SET domain bifurcated 1
  KO
K11421  histone-lysine N-methyltransferase SETDB1 [EC:2.1.1.43]
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu00310  Lysine degradation
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    108266106 (setdb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ipu03036]
    108266106 (setdb1)
Enzymes [BR:ipu01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.43  histone-lysine N-methyltransferase
     108266106 (setdb1)
Chromosome and associated proteins [BR:ipu03036]
 Eukaryotic Type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     108266106 (setdb1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    108266106 (setdb1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: SET DUF5604 Tudor_4 TUDOR_5 Pre-SET MBD DUF4537
Motif
Other DBs
NCBI-GeneID: 108266106
NCBI-ProteinID: XP_017324604
UniProt: A0A2D0R211
LinkDB All DBs
Position
1
AA seq 1237 aa AA seqDB search
MEVDADLGSALDMELGPELEEELGVSLDELRRWIEEQVDSSEVVLHRKAQLAEMQNWVEQ
KEKDMASMDTLCSSASESVIQCEVLVKELYSNIGLEYRESSSEDEGVGGGNASEVIEIDD
DDEDDDDDDEEDDDDDDVIAVGCVVPPNKNVTPVKDSLMEASAALQRSTQQVQNLMQTVG
KPTPSTAITPTKGLAPPSPSRGSMLNIPAVFMSSGPVHAPTQPNPALKQDVMRLNMSILG
KKRTKTWHRGTLIAINSVGNGFKYKVKFENKGKSLLSGNHVAFDYHPTLERLYVGARVVA
KYKDGNQVWLYAGIVAEMPNSKNRMRFLIFFDDGYASYVALPDLYPVCRPLQKTWEDIED
ESCRDFIEEYITAYPNRPMVLLKPGQIIKTEWEGTWWRSRVEEVDGSLVKMLFLDDKRSE
WIYRGSTRLEPMFNLKMSTASNQEKKLAGQQRVRPNMGAMRVKGPVVQYTNENNILANRS
AVTQTTPPRPQITVPSQPVRTETQMAKKSTSPYVPAARQIVTTDLQLKPVGILPQATSSR
LFFLQSGPVQTLTPIAPAPQTLPPTITAMPAMPAISTISTIAPYAGERIPQEPSYQAPND
RLFYMMHTCTPECLKRIRPTRPNLHRGRNPLLTPLLYEFRRMTARRRLNRKVSLEMSFHV
IYKSPCGLSLRNMAEIQRYLFQTHCDFIFLEMFCLDPYVLVDRRFQPQRPFYFIRDITSG
REDIPLSCVNEIDNTPPPSVAYSKERIPEDGVFINTSVEFLVGCDCTDGCQDKSKCSCHQ
LTLQATGCTPGAQINPNAGYNYKRLDECLPTGIYECNKQCRCNPQMCSNRLVQHGLQVRL
QLFKTQNKGWGIRCLDDVAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVEN
FKEGYESEAHCSDSEGSGVDMSRVKMASSQQGKNGPKTEDRNIRSKGQDSSDEGESDDEK
DESNGDESDSSDDTFVKDTYFSSSSVWRSYTTRRQAKGMKEESQDSKDGLSMSAGGTEDR
KPPPVPEECGKSKVASWLTSQSSSTGAPNVKIEGGQKTEKKEVMTLSDSDDVQTISSGSD
DNKEREKKTQAVVKRQVAVKSTRGIALKSSHGMMVKTGGGGGGGSGGHHSQGGITLDNGS
KSTRQFFDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKR
IRAGTELTWDYNYEVGSVEGKELLCCCGSTECRGRLL
NT seq 3714 nt NT seq  +upstreamnt  +downstreamnt
atggaggtggacgcagatttgggctcggccctggacatggagctggggcccgagctggag
gaggagcttggcgtttctctggatgagctgcgcaggtggatcgaggagcaggtggacagc
agcgaggtcgtgctgcaccggaaggcccagttagccgaaatgcagaactgggttgagcag
aaagaaaaggacatggccagtatggacacactctgctccagcgcatcagagtctgtaata
cagtgtgaagttctagtgaaagagctgtacagtaacataggcctggagtatcgggagagc
agctctgaagacgaaggagtaggaggcggcaacgcttccgaggtcatcgaaattgatgac
gacgacgaagacgacgacgacgatgacgaagaagacgacgacgacgatgatgtcattgcc
gtgggctgtgtggttccaccaaataagaacgtaacgccagtcaaagactcgcttatggaa
gcatcagctgcacttcagagatccacgcagcaggtgcagaacctgatgcagacagtcggt
aagccaacgccgtccacggcgatcacgcccactaaaggactggcccctccctctccgtcc
cggggctccatgctgaacattccagcagtgttcatgtcctccggccctgtacacgcaccc
actcaaccaaatccagctctaaagcaggatgtcatgaggctaaacatgagcattctgggt
aaaaaacgcaccaagacctggcaccgtggaactctgatcgctattaactcagtgggcaac
ggctttaagtacaaggtgaagtttgagaataaagggaaaagcctgctgtctgggaaccac
gtggcgttcgactatcacccaacactggagaggctctacgtcggtgctcgtgttgttgcc
aaatataaagatggcaaccaggtgtggctgtacgctggcattgttgctgaaatgcccaac
agcaagaaccgcatgaggttcctgatcttttttgatgatggctatgcttcttatgtagcc
ctgccagatctctaccctgtttgcagacccttgcagaagacgtgggaggatattgaggac
gagtcctgtagggatttcattgaggagtacatcacggcatacccgaacagacccatggtg
ctgctgaagccgggccagatcatcaaaaccgagtgggaagggacgtggtggaggagccgt
gtggaggaagtggacggcagcctcgtcaaaatgctcttcctggatgataagcgcagtgag
tggatctatcgtggctcgactcgcctggagcccatgttcaacctaaaaatgagcacagcc
agcaaccaggagaaaaagctggccggccagcagcgcgtgcggcccaacatgggagctatg
agggttaaaggccctgtggtgcagtacactaacgaaaacaatattctagccaaccgctcc
gcagtcacccagactacaccaccacggccacagattactgttccctcccagcccgtccgc
actgagactcagatggccaagaagagtacgtccccttatgtccctgccgctcgtcagatt
gttaccactgacctccagctcaaacctgtcggcatccttccccaagccaccagctccaga
ctcttcttcctgcagtcagggccagtgcagaccctgacacccatcgctccggctccccaa
accttgccacctaccataactgccatgcctgccatgcctgccatatctaccatatctacc
atagctccctatgcgggcgagcgtattcctcaggagccgtcctatcaggcccctaatgat
cgccttttctatatgatgcacacctgcacacctgagtgtctgaagcgcatccggcccacg
cgacccaacctccaccggggccgaaacccactcctcaccccacttctgtacgagttccgc
cgcatgaccgcgcgccgccgcctgaaccgcaaggtcagtttggagatgtccttccatgtg
atctacaagtccccatgtggcctgagcctgaggaacatggcggagatccagcgctacctc
ttccaaacacactgtgacttcatcttcctggagatgttctgtctggacccatacgtcctg
gtggaccgccgcttccagccacagaggcccttctatttcatccgggacatcacaagtgga
cgcgaggacattccgctgtcctgcgtcaatgagatcgacaacactccgccacccagcgtg
gcttacagcaaagagcgcatccccgaggacggcgtcttcatcaacactagcgtcgaattc
ctggtgggctgtgactgcaccgatggctgccaggacaagtcaaagtgttcatgccaccaa
ctgaccctgcaggccacggggtgtactcccggtgcacagatcaatcccaacgctggctac
aattacaagaggctggatgagtgcttacctactgggatctacgagtgtaacaagcagtgc
cgctgtaatcctcagatgtgctcgaaccgcttggtgcagcacggcctccaagtgcgcctg
cagctctttaagacccagaacaagggctggggcatccgctgcctcgatgacgtggccaaa
ggctcttttgtctgcatctatgcagggaagatccttacggacgactttgcggacaaggag
ggcttggagatgggtgatgagtactttgctaacctggaccatatcgagagcgtggagaac
tttaaggagggttatgagagcgaggcacactgctcggacagcgagggcagcggcgtagac
atgagtcgggtcaaaatggcttcgtcccagcagggcaaaaacggccccaagacagaggac
cgcaacatccgcagcaaaggccaagactcttctgatgagggggagagcgatgatgaaaag
gacgagtcaaacggtgatgagagcgatagctccgatgacactttcgtgaaggacacgtac
ttttcctccagctcagtgtggaggagctacacgacacggcgacaggccaagggcatgaag
gaagagagtcaggacagtaaggatggtctgagcatgtccgccggaggaacagaggacagg
aagccaccccctgtgccagaggagtgtgggaagagtaaagtagcctcatggctgaccagc
cagtcctcctccaccggagcaccgaatgtcaaaatcgagggagggcagaagacggagaag
aaggaggtgatgaccctctccgacagcgacgatgtgcaaacgatcagctctggctctgac
gacaacaaagagcgtgaaaagaagactcaggctgtggtgaagaggcaggtggctgtgaaa
tcgacgcgaggcattgctttaaagtcctcgcatggcatgatggtgaaaacaggaggtggt
ggaggtgggggctcgggaggccatcatagccaaggaggcattaccctagacaatggttcc
aaaagcacacggcagttctttgatggggaggagtcgtgttacatcattgatgccaaactg
gagggcaaccttggacgctacctcaatcatagctgcagtcctaacctgttcgtccagaac
gtgttcgtagacactcatgacttgcgatttccgtgggttgccttcttcgccagcaagaga
atccgtgccggaacagagctgacatgggattataattatgaggtcggcagtgtggaagga
aaagagcttctctgctgctgtggttccaccgaatgccgaggacgactgctctaa

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