Ictalurus punctatus (channel catfish): 108266410
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Entry
108266410 CDS
T04658
Name
(RefSeq) glutamate receptor ionotropic, kainate 5
KO
K05205
glutamate receptor, ionotropic kainate 5
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108266410
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108266410
Ion channels [BR:
ipu04040
]
Ligand-gated channels
Glutamate (ionotropic)
108266410
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
GyrI-like
Motif
Other DBs
NCBI-GeneID:
108266410
NCBI-ProteinID:
XP_053536628
UniProt:
A0A9F7TIJ8
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Position
1:10976839..11052402
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AA seq
1052 aa
AA seq
DB search
MPELPAVLLSIHVHFLLVTVLNMPPCSVSQTPVLSSVRMAAILDDRSACGRGERLALALA
RENINSMLEGPARARVDVEVFELQKDSQYETTDTMCQILPKGVVAVIGPASSPASGSTVS
HICGEKEIPHVKIGPEETPRLPYLRFASVTLYPSNEDLSLAVGAILRSFSYPSASLVCAK
AECLLRLEELVRRFLISRETLSVRMLDDDLDPTSLLKEIRDDKIATIIIDANASVSYLIL
KKASELGMTSAFYKYILTTMDFPLLWLDDVVDEHSNIVGFSMFNTTHPFYLEFIRSLNLS
WREGCDLNPYPGPTLSSALLFDAVHVVASAVQELNRSQEIGVKPLSCSSPQIWQHGTSLM
NYLRMVEYDGLTGRVEFNSKGQRTNYTLHILEKHKSGHKQIGIWYSNNTLVMNSTSLDIN
VSETLTNKTLIVTTILENPYVMRKANYQELEGNEQYEGFCVDMLKELSDILKFTYRIKLV
DDGLYGAPEPNGSWTGMVGELINRKADLAVAAFTITSEREKVIDFSKPFMTLGISILYRV
HIGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPHPCLRERRDLLE
NQYTLGNSLWFPVGGFMQQGSEIMPKALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQR
MEVPIESPDDLADQTNIQYGTIHGGSTMTFFMNSRYQTYQRMWNYMYSKQPSVFVKSTEE
GIARVLNSKYAFLLESTMNEYHRSLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEISLAVL
QLQENNRLEILKRRWWEGGQCPKEEDHRAKGLGMENIGGIFVVLICGLIIAVFVSVMEFV
WSTRRSAETDEVSVCQEMLNEFRNAVSCKKSSRLRRRRPLSSSLALRHPARLSLGASRPL
RLVREMRLSNGKLYSGAGPLTGGSGGAGGPSELGPGPQRLLEEPLGAKSTPAGPLGPPAV
TVPLPRGCTHVRICQECRRIQSLRTTSCSRIPPSSAPLPRLAPPPPRSSSNTDSEGGGGP
SPRRRGHSPPPRACALPPPQSTANTDLLGGQD
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgccagcagtgctgctgtcgattcacgtccacttcctgctagttactgtg
cttaacatgccgccttgttctgtaagccagacccctgtcctgtcatctgtgcgaatggcg
gcaattttggatgaccgctctgcctgtggccgtggagagcggttggctttagctttagca
cgggagaacatcaacagcatgctggagggaccagctcgtgctcgcgtggatgtagaagtc
tttgagctccagaaagactctcagtatgagaccacagacaccatgtgccagattctgcct
aagggtgttgttgctgtgattggccccgcctccagtcctgcctcaggttctactgtcagt
cacatctgtggggagaaggagatccctcatgtgaagattggtcctgaggagactccacgg
ctgccttacctgcgtttcgcgtccgtcacattgtatcctagcaacgaggatctgagcttg
gccgtgggtgccatcctacgctctttcagctacccatcagccagtctggtctgtgccaag
gctgagtgtctgctgagattggaggagctggtgaggcgttttctcatctccagggaaaca
ctgtctgtcagaatgctggatgatgatctcgatcccacatccttactgaaagagatccgc
gatgataaaatagctacaatcatcattgatgctaatgcttctgtgtcatacctgattctg
aaaaaggcatctgaattagggatgacatcagcattttacaagtacatcctcaccaccatg
gactttcctttgctgtggttggatgatgtggtagatgagcactccaacattgtgggcttc
tcaatgttcaacaccactcacccattttacctggagtttatccggagcctcaacctgtcc
tggagagaaggctgtgaccttaacccatacccaggaccaacgctgtcttcagctttgctg
ttcgatgccgtccatgtggtagcgagcgccgtacaggagctgaacagaagtcaggaaatt
ggagtgaaacccttaagctgctcctctccgcagatctggcaacatgggaccagcctcatg
aactacctgcgcatggtggagtatgatggtttaacaggccgtgttgagtttaacagcaaa
ggccagagaaccaactacaccctgcatatcctggagaaacataaatcaggccacaaacag
attggcatttggtattctaacaacaccctggtcatgaactccaccagtctagatatcaat
gtctctgaaactttgaccaacaagaccctcattgtcaccaccatactggagaacccgtat
gtgatgaggaaagcaaattatcaggaactagaggggaatgagcagtatgaaggcttctgt
gtggacatgctgaaggaattatcagacattctgaagtttacttatcgaatcaaactggta
gatgacggtctgtacggagctccagaaccgaacggttcctggactggcatggtgggggag
cttatcaacagaaaagcggatttagccgtagctgctttcactatcacctctgagagagag
aaagtcatcgatttctccaaacctttcatgaccctgggcatcagtattctttaccgagtc
catataggtcgaaagccgggttatttctcattcctggatcccttctctccggccgtttgg
cttttcatgctgttggcctacctggctgtcagctgtgtgcttttcctcgctgctaggtta
agcccttatgagtggtataaccctcacccgtgcttgcgggaacgccgggacctgctggag
aaccagtacacactaggaaacagcctgtggtttccagtgggaggcttcatgcagcaggga
tcagaaatcatgcctaaagctctgtctacacgctgtgttagcggagtctggtgggcattc
actctgatcatcatctcctcgtatacagccaatctggctgcatttctgacagtgcagagg
atggaggtccccatcgagtcacccgatgacctggcagaccaaaccaacattcagtatggc
actatacatggtgggagtaccatgaccttcttcatgaactcgcgttaccagacataccag
cgcatgtggaactacatgtactccaagcagcccagtgtgtttgtgaagagcacagaggaa
ggcattgctcgtgtactgaactctaaatatgcctttcttctggagagcaccatgaatgag
taccaccgcagtctcaactgcaatctcacacagattgggggactgctggacaccaagggc
tatggcattggcatgcctcttggctctcccttcagggatgagatcagtctggctgttctg
cagctgcaagaaaataataggctggagattttgaagagaaggtggtgggagggagggcag
tgccccaaagaggaggaccacagagctaaaggtctaggaatggagaatattggtgggatc
tttgtggtattgatctgtggattgatcattgctgtgtttgtgtcagtgatggagtttgtg
tggtccacacggcgctctgctgaaacagatgaggtgtctgtgtgtcaggagatgttgaac
gagtttcggaatgctgtgtcatgtaagaagagctctcgtttgcgccgacgtcggcctcta
tcaagctctttagccctgcgacacccggcccgcctcagcttgggggcctcacgtcccctg
cgcctggtcagagagatgcgcctcagcaatggcaagctctacagtggtgctgggccttta
acaggaggctctggaggtgcaggaggcccctcagagcttggtcctggacctcagcgtctc
ttagaggagcctctgggggccaagagtacacccgcagggcctctaggcccccctgcagtg
actgtgcctctaccacgaggctgcactcatgtacgaatttgccaggagtgccggcgcata
cagagcctacgtacaacctcgtgctcccgtatccctccatcctcggcaccgctgcctcgc
ctagctccgcccccgccacgctcctcctccaacacagacagcgaggggggtggcgggcct
agcccgcgccgaagaggccactcccctcctccgagagcctgtgcactcccaccccctcag
agcaccgcaaatacagacctactgggaggccaggactga
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