Ictalurus punctatus (channel catfish): 108266532
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Entry
108266532 CDS
T04658
Name
(RefSeq) transcription factor CP2-like protein 1 isoform X5
KO
K09275
transcription factor CP2 and related proteins
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108266532
Transcription factors [BR:
ipu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Grainyhead
108266532
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GFIT
Motif
Pfam:
CP2
SAM_3
Motif
Other DBs
NCBI-GeneID:
108266532
NCBI-ProteinID:
XP_017325463
UniProt:
A0A2D0R4D8
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Position
6:19034392..19057991
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AA seq
466 aa
AA seq
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MFHHKAQSGCVRETVATLLKAKQERHSAGSEAKPPPFQYILCAATSPAVKLHEETLTYLN
QGQSYEIRMLNRKLLECTHVSSKWVKSTVRVVFHDRRLQYSEYQQLEGWSWNRPGDRILD
LDTTLSVGIIEPQANPLQLNTFEFLWDPIKNASIFIQVNCISTEFTPRKHGGEKGVPFRI
QVDTFIQNEHGEYLEQVHSSSCQIKVFKPKGAYRRLKTDREKIEKKSLQEREKYQPSFET
TVLTECSPWPDGTSINSVSSTLSPICHISTSHNFTDGDDRDCSLNQQRELLLPSCSAQLV
PSLSHQEAQEWLCQNRFSSFCRLFSKFSGADLFKMSRNYFVQICGPADGIRLFNAIKGRC
IQPCLTVYVSLQKNKNQPNSKPCSDDVYHALSLEHLTLFELTEKIAGLYSVPVQKICHVY
RQGPMGIYVLVSDEMVKNFTEETRFIISALKVMMDESNEGYHVVLK
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgttccaccacaaagcgcagtctggttgtgtaagagaaacagtagctacactgctgaag
gccaagcaggagcgacactcagccggatctgaggccaaaccacccccctttcaatatatc
ttgtgtgcggccacttctccagctgtcaaactgcatgaagaaactctcacctacctcaac
cagggtcagtcctatgaaatccgtatgcttaaccgaaaactgttggagtgtacacatgta
agcagcaagtgggttaagagcactgtccgtgtggtgtttcatgatcggcgcctgcaatac
agcgagtaccagcagctggagggatggagctggaaccggccaggagatagaattctggat
cttgatactaccctctctgtggggataatagagcctcaagctaatccactgcagctcaac
acttttgagttcctctgggatcctatcaaaaatgcctcaatatttattcaagtaaactgt
attagcactgagtttacacccaggaaacatggcggagagaagggagttcccttccggatt
caggtagatactttcatacagaatgagcatggagaatacctggagcaggtgcactcttcc
agctgccaaatcaaagtctttaagccaaaaggagcatatcgcaggttgaagacggacaga
gagaaaattgagaaaaagagtcttcaagaaagagaaaaatatcaaccatcatttgaaact
actgtacttactgagtgttctccctggccagatggaacatccatcaatagtgtgagcagc
actctgtctcccatttgccacatctctacttctcacaatttcacagatggagatgataga
gactgctctctgaaccagcagagggagctactcctgcccagctgctctgctcagcttgtg
ccatcactctcccatcaggaagcacaggagtggctctgccagaacaggttctcatctttc
tgtaggcttttctccaaattctcaggtgctgatttgtttaagatgagcagaaattacttt
gttcagatctgcggtcctgctgacgggatccgcctgtttaatgccattaaagggaggtgt
attcagccatgcctcacagtgtatgtttccctacagaagaacaaaaatcagccaaacagc
aagccatgcagtgatgatgtgtaccatgccttgtccttggagcacttaactctttttgag
ctcacagagaagatagcgggtctatacagtgttccagtacagaaaatctgccatgtttac
agacaagggccaatggggatatacgtcctggtttcagatgagatggtgaagaatttcaca
gaggaaacaagattcataataagtgctctaaaagtgatgatggatgaaagtaatgagggg
taccatgttgtactgaagtga
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