Ictalurus punctatus (channel catfish): 108268092 Help Entry 108268092         CDS       T04658                                  Name (RefSeq) brevican core protein isoform X1   KO K06795   brevican Organism ipu  Ictalurus punctatus (channel catfish) Brite KEGG Orthology (KO) [BR:ipu00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:ipu00535]     108268092    00536 Glycosaminoglycan binding proteins [BR:ipu00536]     108268092    04091 Lectins [BR:ipu04091]     108268092 Proteoglycans [BR:ipu00535]  Extracellular matrix (ECM) proteoglycans   Aggrecan / versican family    108268092 Glycosaminoglycan binding proteins [BR:ipu00536]  Hyaluronan   Extracellular matrix or blood plasma proteins    108268092 Lectins [BR:ipu04091]  C-Type lectins   Group 1: Proteoglycan core proteins    108268092 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Xlink Lectin_C V-set Sushi EGF ig hEGF Ig_3 Motif Other DBs NCBI-GeneID:  108268092 NCBI-ProteinID:  XP_017328281 Ensembl:  ENSIPUG00000006560 UniProt:  A0A9K3Y7Z1 LinkDB All DBs Position 1:complement(16240069..16269889) Genome browser AA seq 1352 aa AA seqDB search MRFLNFPRLFEERFHHHHHPSLCLDELTCQKIAFFESALIRTVLHLTHSRPTFPSSTIAS NNKCSMRERERERGREGGGALFHTSSCALFSPPFLFSVLSLGVVHTQGTGSPSFAFLLQK STLLAQDCLGMRSMMFLSLLLCAICPFVLLSSAVPVPGTDETRLLQVMIPDSPPVSAVLG GSLTLHCHVSLPPLSFLGRFAGNTMPRVKWSMLSSGRETEILVARGERVKISEPYKGRAT LPNYDSSPTDLTLRLDSLRHNDTGFYRCEVQQGLEDAHVLAQIKVKGVVFHYRHASNRYA FSFGEAKNACEDIGAQIATPEQLLAAYNSGYEQCDAGWLADGSVRYPIHTPREGCFGDMD GLPGVRNYGMMEADELYDVYCYIENIHGKVFYGSTSQRFTLAEAKAYCEQQGAQLASTSQ LYAAWNDGLDHCSPGWLADGSVRYPIVNPRERCGGSEPGVKTVYRYSNQTGFPEPHTRYD AYCFRAVLSSQTDIGQDIVTLADTEEEFSLGHVTQKTESEAQGAVEIFSFSSKHTVKTEE HDPTPSPFDKVHTTIASRIILTTPAIYGQKPEPTQSSWQEVLIKPIDSEAVPKIHLEPSW TQPKSAEDQDKENSTVNSEVKTHDQLMPDINLELGEQVEYNIFAESKPNTTTDNMEPLYE FTENGVSESMPETILDNQGESHVDEHSTVIEEQAGNFTVALESDVSLDFRTQTTSSEITE GSGNELTTAFTEKIGPNVTVRQDDSYERSSSEVTTESSLLEDISQPTMSFEQSHEQTVAT VTSSTVAQVEQETGHTSAAESLVVSLGSADNDGDHESGVTAIPVHFSEKQTEPIDGSGDD ENVLLLTLLTAPAPHLLGTSISPNALVVEASSPQELDITVPEISTPSGISIIKEEVKQFE QERVENAPVLHPMPATPLTETKTMSSKDSTGHEDNSSGTDNSSGMGSLVSDLSYLNATPI IPFNSTYLLNITEVNDTENVPSTTHFAVAVTLIPDMTLTPIWDPMTPPTPPQEFRADVEL SSDTPVITDDPDFSAESDSTAAPTTENPEETQSLTSSVATNDQEREDQDLIPTTESPNSK EEEELTTPTHHTTPPPRLTERVLDRTGRSDDCLENPCANGGTCVDIGTSVRCLCLPTYGG EFCQTDLEQCEPGWEKFQGNCYKHFSKRQSWEVAEQHCRMCGGHLVSVMSPEEQYFINHK YKEYQWTGLNDRTIEGDFRWSDGNPLLYENWYRGQPDSYFLSGEDCVVMVWHDDGRWSDV PCNYHLSYTCKKGTTACGQPPLVLNAKQFGERQARYVINAQVRYHCEEGFLQRHKPIIRC QNNGRWEEPQITCTPQPVDLSRKQVTLPSAKN NT seq 4059 nt NT seq  +upstreamnt  +downstreamnt atgcgctttctaaacttccctcgtctattcgaagaacgttttcatcatcatcatcatcct tcactttgtctcgatgagctcacctgccagaaaatcgctttctttgaatctgccctcatt cggaccgttttgcatctgacgcactcccgtcctactttcccctcatcaaccattgcgtcg aataacaagtgctccatgagagagagagagagagagagagggagagagggagggggggcg ctgttccatacttcttcctgtgcgctcttttctcctccttttctcttctctgttctcagt ctcggggttgtgcacacacagggcacaggttcgccttctttcgcctttctactacagaaa agcacattactggcgcaagattgtttagggatgcgatcaatgatgttcctgtctctgctg ctgtgtgccatctgtccctttgtcctgctgtcctctgctgtccctgtaccaggaacagat gaaaccaggctcttgcaagtgatgatccccgacagccctccagtgtcagccgttttggga ggatccttaaccctgcattgccatgtatcactgccacccctgtccttcttgggccgcttt gctgggaacaccatgccgcgggtaaagtggagcatgctctcctctggacgagagactgag atcctggtagcacgaggggagagggtgaaaatcagtgagccttataaaggtcgggccact ctgccgaactatgactcctctccaactgatctcaccctccggctggacagtctgaggcac aatgatacaggattctaccgctgtgaggtccagcagggactggaggatgctcatgttctg gctcaaatcaaagtgaaaggcgttgtgtttcactatcgacatgcctccaatcgctacgca ttctcttttggtgaggccaagaatgcatgtgaagacattggagctcagattgccactcca gagcagcttctggcagcatacaacagtggttatgagcagtgtgatgctggctggttagca gatggatctgtcagataccctatccatacgcctcgtgagggatgttttggagatatggat ggcctgccaggggtccggaactatggcatgatggaggccgatgagctttatgatgtttat tgctacatagaaaacatacatggcaaagtgttctacggatctacctcacagcgattcaca ctggctgaggctaaagcatattgtgaacaacagggggcacaattagccagtacaagccag ctatacgctgcatggaatgatggtcttgatcactgtagcccaggttggctagctgatggt agtgtacgctatcctattgtaaacccccgagagcggtgtggggggtctgaacctggcgtt aagacagtctatcgttacagcaatcagacaggctttcctgagcctcacactcgctatgat gcctactgcttcagagcggtccttagttctcagacagacattggccaggacattgtgacc ttagctgacacagaggaagagttcagtctaggtcatgtgactcagaagacagaaagtgag gctcaaggggctgttgagattttctcattctccagtaaacacacagttaagacagaggag catgaccctacaccatccccatttgataaagttcatacaaccattgctagcagaattatc ctcaccactccagcaatatatggacagaaacctgagccgactcagagctcctggcaagaa gtgctcatcaagcccattgattctgaggcagtgccaaagatacacctggaacccagctgg actcaaccaaagtcagcagaagaccaagataaagagaatagtacagtcaattcagaagtg aagacacacgatcagttaatgccagacatcaacctggagctgggtgagcaagtggaatac aacatatttgcagagagtaaaccaaacacaacaactgacaacatggagccattatatgag tttacggagaatggagtatctgaatccatgcctgagaccatccttgacaatcaaggtgaa agccatgtggatgagcattccactgtaatagaagaacaagcaggtaacttcactgtggca ttggaatcagatgtcagtctggacttcagaactcagaccacttcttcagaaattactgag ggctcaggaaatgaattgactacagcattcactgagaagattggccccaatgtcacagtg agacaagatgattcgtatgaacgttcatcatctgaagtcaccacagagagttctttgctg gaagatataagtcaaccaacaatgagttttgagcaaagtcatgagcagactgttgcaaca gtcacttccagtactgtagctcaagtggagcaagaaacaggacatacttcagcagctgaa tccctagtagtgtctcttggttcagctgataatgatggtgatcatgagtcaggtgtgact gcgatacctgtacatttttcagagaaacaaacagaacccattgatggttctggtgatgat gagaatgtgctactgttgactcttctgactgcaccggcgcctcacctgttgggcacatca atttccccaaatgcattagttgtggaggctagttcccctcaggagttggacattactgtt ccagagatcagtactccatctggcatcagcatcataaaggaggaggtgaagcagtttgag caggagagggtggaaaatgcacctgtcctccatcccatgccagcaacaccactgactgag accaagacaatgtcaagcaaagacagcactggccatgaagataactcatcaggaacagac aactcttctggaatgggatctttagtctcagatctctcctatctcaatgccactcccatc atacccttcaactccacatacctgctgaacataacagaggttaatgatactgaaaatgtt cccagcaccactcattttgctgtggcggttacactgatcccagacatgaccctgacacca atttgggaccctatgacccctcccaccccaccacaggagttccgggcagatgtggagctc agcagtgacactccagtaatcacagatgatcctgacttctcagccgagtcagactctact gcagctcctaccactgagaaccctgaagagacccagagtctgacctcctccgtggcaacc aatgaccaggaacgtgaagatcaggacctgattcccaccacagaatctccaaacagcaag gaagaggaagaactgacaaccccaacacaccatacaacaccacctcccagactaacagag agagtgctggacagaacaggcagatcagatgactgtttggagaatccatgtgctaatgga ggcacctgcgtagacatcggtactagtgtcagatgcctgtgtctgccaacctatggggga gaattctgccaaactgatctggagcagtgtgagccaggctgggaaaagttccagggcaac tgttataagcacttctcaaaacgtcagagctgggaggtggcagagcagcactgtcggatg tgtggcggtcacctggtctctgttatgtcacctgaagagcaatatttcatcaaccataag tataaggagtaccagtggactggtctcaatgacaggaccattgagggtgacttccgctgg tccgatggaaacccgctgctgtatgagaactggtatcgtggtcagcctgatagttatttc ctatcaggagaggactgtgtggtgatggtatggcatgatgatgggcgctggagtgatgtg ccctgtaactaccatctgtcctacacttgcaagaagggcaccactgcatgtggccagcca cctcttgtcttgaatgctaagcagttcggtgagcgacaagcgcgatatgtgattaacgct caggtgcgttaccactgtgaggagggtttccttcagcgacacaaacccatcatcaggtgc caaaacaatggacggtgggaggagccacagatcacctgtacaccacaaccagtggattta agtagaaaacaagttacattgccttctgcaaagaactag

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