Ictalurus punctatus (channel catfish): 108271154
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Entry
108271154 CDS
T04658
Symbol
gli2b
Name
(RefSeq) zinc finger protein GLI2b
KO
K16798
zinc finger protein GLI2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
108271154 (gli2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108271154 (gli2b)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
108271154 (gli2b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
FOXP-CC
Zap1_zf1
zf-C2H2_4
Invasin_D3
Motif
Other DBs
NCBI-GeneID:
108271154
NCBI-ProteinID:
XP_017333982
Ensembl:
ENSIPUG00000021082
UniProt:
A0A2D0RU03
LinkDB
All DBs
Position
10:complement(23532830..23624148)
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AA seq
1483 aa
AA seq
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METSASTAAEKKECKTAGLDANSFCEMPKKPSPTLLSRGPHHIFPTFHTPIPIDIRHHEG
RYHYEPHGLTPLHGAPALGSPVISDISLIRLSPGGPAESPFSPPHPYVSPHVEHYLRSVH
GSPTLSMISAARGLSPADVAHEHLKERGLFGLPPPPHGASSADYYHLMASHRSPYGDLIA
AGSTTAAAAAAAAAAVHLPDYINPMDMSRFPSPRLTPRLSRKRALSISPLSDASIDLQTM
IRTSPNSLVAYINNSRSSSAASSSYGHLSVGGISPSFPFHHSINPVAYQQLLSHQRGLSP
FGHTPPLIQPSHTFSSRQHTLAGSGLSVSTHNEAETKNPSGDSAVSSTVNPMHTKRSKVK
LELDSSRPLSPCSPDPSPPVDPKEDVDREEGKQEPEVAYETNCHWEGCSKEYDSQEQLVH
HINNEHIHGEKKEFVCRWEECSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCSKAYSR
LENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYT
DPSSLRKHVKTVHGPEAHVTKKQRGDLMPRPQPPPRENGENEGGTKQSGRGGQDKFEANS
TTRGMEDYLQVKSIKTENSVMYQSSPGGQSSCSSQPSPLGSATHHDGGIELSGPGGGSMG
DLSMLDDVPLVDSTVSTGTLGLHLRRSASPARRLNHLKQEKLKTVRESCSWANAVPQAPD
TKLPPIPSNGSLLESSGCVGNIPVPITGLRLSDICPGETTVLCQPVERRDSLASTVSSAY
TLSRRSSGISPCYSSRRSSQASQPGIRLNNVSSADSYDPISTDLSRRSSEASQCGGLPGL
LSLTPAQHYRLKAKYAAATGGAPPTPLPNMDRMSLRTRIALLGDPHDATMHPLGLPTVPR
RCSDTGYPTASMMPHEVPGSITRRASDPVRRVAVDQQRLQQGQRFNSMSNVNPNSLPHYA
SSSRHLSVQSFVRSDGSLHRLQYPPRPPSISENTAMDTSDMDGPINSIADDLMLPDDMVQ
YLTSNGDSTQHNGSGYRHQQAQGFLGNGAPPNQPCFYQRRMAIVDGIANSMTQPTSASCQ
TSPAHQHMSPSANKSHMPVQWNEVSSGTVEASPSQIKQQQALDWGTITGLQQKQNFGPIQ
NLKSNQQVRPMSQNLAHAAQQSSMQRNEVMAQRMNCSQTLRQQGNKNHLNEHIHNQHVYH
QGNDINRSTSQHASCGNIIGGNVGLTSPSKKTVQPVHMQNNRVRTKPVVSQSHVNFENNQ
GDYSHMSSDQHSYDTLSQNPTLNGNHGLLQPRPPTEPKPFARQHSGPNATTAQQLGYPQS
HFSLAYNTSEASPKKPVNVGVSDTDSNAMFYTGQIHMFQSSNLNMHDNTEAVDCGTDNVT
MVAVSSPGTNQVSSTVDSSSGVEQTQIDFDAILDDGDHSSLMSGTISPSILRSLSQNSSR
LTTPRNSVTLPPVPAGIGNMAIGDMTSMLTTLAEESKFLNMMS
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atggagaccagtgcctccacagctgctgagaaaaaagagtgcaaaacagctggactggat
gccaacagcttctgcgaaatgcccaagaagccttcacctactctcctaagcagagggcct
catcatatattcccgactttccacacgccaatccccatcgacatacgtcaccacgaagga
agataccactacgaacctcatggccttacccccttgcatggagctccagcgttagggagt
ccggttatctctgatatatccctgatccggctctcaccaggcggcccggccgagtcgccc
ttcagtccccctcacccctatgtctcaccccatgtggagcactacctgcgctcggtccat
ggcagcccaacactttccatgatctcagcggctcgtgggctcagccctgcagatgttgcc
catgagcacctgaaggagcgtgggctatttggtcttcctcctccccctcacggagccagc
tcagctgattactaccacctgatggcaagtcacaggagtccatatggagatctgattgca
gctggatccaccactgctgctgctgcagctgccgccgctgctgctgttcacctcccggac
tacatcaacccgatggacatgtcgcgttttcccagtccacgcctcacacccaggctgagc
cggaagagagctctgtccatctctccactttcagacgccagtattgacctacagactatg
atccgcacttctcctaactctctagtggcctacatcaacaactcgcgctccagctcggcc
gctagcagctcgtacggccatctctccgtcggaggcatcagcccttcttttcctttccat
cactccatcaacccagtggcatatcaacagctgctgtcccatcaaagaggcctgagccct
tttggacacacgcctcccctcatccagccttctcacacattctcctccagacaacacacg
ctcgccggctcgggactgagtgttagcacacataatgaggctgagactaagaacccgagt
ggtgactctgcagtcagcagcacagtaaacccaatgcacaccaaaagatcaaaggttaag
ctggagttggacagctctcggcctctctcaccctgctcaccggacccgtcaccacccgtg
gacccgaaagaggacgtggacagagaagagggcaagcaggagccggaggtggcttatgag
acaaattgccactgggaaggctgcagcaaggagtacgacagccaagagcagcttgtccat
cacatcaataatgagcacatccatggggagaagaaggagtttgtgtgtcgttgggaggag
tgctccagagagcagaagcccttcaaggcccagtacatgctggtggtgcacatgcgcaga
cacacaggagagaagccacacaagtgcacttttgaaggttgctcgaaggcgtattcacgt
ttggagaacctgaaaacacaccttcgctcacacactggggagaaaccatacgtgtgtgaa
cacgaaggctgcaacaaggccttttccaatgcctcggaccgagccaagcatcagaaccgc
acacattccaatgagaaaccatatgtttgtaagattccgggttgtaccaagcgctacaca
gacccgagctctctccgcaaacatgtcaaaaccgtgcacggcccagaggcacacgtcacc
aagaaacagcgtggtgacctgatgccccgacctcagcccccaccacgagagaacggagag
aacgaaggaggaacaaaacaatctggccggggaggacaagacaagtttgaggccaacagc
accactagaggcatggaggactacctgcaggtcaaatcgataaaaacagagaactctgtg
atgtatcagtccagccctggtggtcagtcatcatgtagcagccagccgtcaccgcttggc
agtgccacccaccatgacggtggaatagagttgtcgggccccggcgggggcagcatggga
gacctgagcatgctggacgacgtgcctctggtggactcaaccgtctctacaggcacactg
ggcctccacctgcgcaggagtgccagccccgctcgcaggctgaaccacctgaagcaagag
aagctgaagacagtgagggagtcgtgctcctgggcaaatgctgttccacaagctcctgac
accaagctaccaccaatccctagcaatggttccttactggagagctctggatgtgtcggc
aatattcctgtacccatcaccggccttcgtctgagtgacatttgccctggtgagacgaca
gtactgtgccagccagtggagcgtcgagacagcctggcgagcacggtgagttcagcttat
acgctgagccgccgctcctctggcatttctccctgctactccagccgccgttccagccag
gcctcacagcccggcatccgcctcaacaacgtcagctcggccgactcatacgaccccatc
tctacagacctgtcacgtcgctctagtgaggccagtcagtgcgggggcctgccaggtctg
ctcagcctcacccctgcccagcactaccgactcaaagccaaatatgccgcagcaacaggt
ggcgctccacccactcctttgcccaacatggatcgcatgagcctgaggacacgaatagcc
ctgctgggagatccacatgatgcaactatgcacccacttggcctccccacagtgcccagg
agatgtagtgatactgggtatccaactgctagcatgatgccccacgaggtaccagggagt
ataacacggcgggctagtgatccagttagacgggtggctgttgatcaacaacgtctccag
caggggcagcgtttcaacagcatgagcaatgtgaaccctaattcactcccacactatgcc
tcttccagccgccacttgtcagtgcagagctttgttcgctctgatggtagtctacaccgc
ctccagtaccctccccggcctcccagcatctctgagaacactgcaatggacacaagcgac
atggatggtccaatcaatagcattgctgatgacttgatgttgcctgatgatatggttcag
tacctcacttctaatggagattctacacaacacaatgggtctgggtatcggcaccagcaa
gcacagggcttcctagggaatggtgctcctccaaatcaaccatgtttctaccagagacgc
atggctatagtggatggcattgcgaacagcatgacgcagccgacatcagcttcttgccag
actagtccagcgcatcagcacatgtctcccagtgccaacaagagccacatgcctgtacag
tggaatgaggtcagctcagggacagtagaggcatctcccagccaaatcaagcaacaacaa
gctttggattggggaactataactggtctccagcaaaaacagaactttggccctatccag
aacctcaagtccaaccagcaagtaagacccatgagtcagaaccttgcacatgctgctcaa
cagagttctatgcagaggaatgaggttatggcccaaaggatgaactgtagccaaactctt
aggcagcaaggcaacaagaaccacctgaacgagcatattcacaatcagcatgtataccac
caaggaaatgacataaacagaagcaccagtcagcatgcctcttgtggtaatattatagga
ggcaatgtaggtttgacaagcccatctaagaaaacagtgcagcccgtgcacatgcagaat
aacagggtaagaactaagccagtggtcagtcaaagccatgtaaattttgagaataatcaa
ggagattattcccatatgagcagtgatcagcatagctatgatactctttcccagaatcct
accctgaacggaaaccatggtctactgcagccaaggccgcccacagaacctaaacccttc
gccaggcagcactcagggccaaatgcaacgacagcacagcagcttggttacccacaatcc
catttcagcttagcatacaacacttccgaagctagccccaaaaagcctgtcaatgtaggt
gttagtgacacagacagcaatgccatgttctacacaggacagatccacatgtttcagtcc
agcaatctgaatatgcatgacaatacagaagcagtggactgtggtacagataatgtaaca
atggttgctgtcagctccccaggaactaatcaagtctcaagcacggtagactcctccagt
ggagtggagcagacccagattgactttgatgccatactggatgatggcgaccactccagt
ctcatgtcaggaactataagtcccagtatcctccgcagcctgtctcagaattcctcccgc
ctcactacgccccggaactctgtgacattgcccccggtacccgcaggaatcggcaacatg
gccattggagacatgacctccatgttgaccacgctggcagaagagagtaagtttcttaac
atgatgtcttaa
DBGET
integrated database retrieval system