Ictalurus punctatus (channel catfish): 108271299
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Entry
108271299 CDS
T04658
Name
(RefSeq) peroxisomal ATPase PEX6
KO
K13339
peroxin-6
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108271299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108271299
Membrane trafficking [BR:
ipu04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
108271299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
DUF815
AAA_22
AAA_5
RNA_helicase
RuvB_N
AAA_7
AAA_33
AAA_28
Rad17
nSTAND3
AAA_18
AAA_14
Mg_chelatase
TsaE
AAA_25
Vps4_C
Parvo_NS1
TIP49
AAA_17
IstB_IS21
bpMoxR
AAA_24
Motif
Other DBs
NCBI-GeneID:
108271299
NCBI-ProteinID:
XP_017334270
Ensembl:
ENSIPUG00000002259
UniProt:
A0A2D0RWE2
LinkDB
All DBs
Position
10:11526118..11540683
Genome browser
AA seq
1086 aa
AA seq
DB search
MAAPVKFVCLDQFPPDMHPLQAVVRKLQLTEIFSNSTGTSCALLLSCQETQTSTKSAVLV
CAHITAEEFPDCTVHSNTSTLAVYVSKAFLSHYNFQEETPGIARILQPLPLDKIVIGART
KQSFRWASSEEFSSFLLVLASCPGQTVLVRRGDTLILPHHPLLGDNATLVRQYLSDLVVL
DCTPLTHGMITVNTTVVVSDCRDLLHGHGALDSADSSVTLRPSSVSLFVSDFAHYANNLG
PASSFLSNRLLFSSGFTEVLQALECRLDVQVTCDNAKLCKLANFGRKIGKNAEVDMDSSI
FVSKTLLLKLGLFNGEWVMAALGKVKRCSGPEGAQSPPDNECGAKAMTKTKGDSHLAKIV
AFIKSSDMDVSDNAGFISPVLWFNLSNGEGTPVGSKSLKIKRWNKAPLQPGHKLSASICC
SAAPPYAKELHIDAVMSPDYDSHGPFDNILFKHFSTPRLVQQGSILGIPTQGHLDFLENS
SDEITRWPVLYFKVKQVSGFSEDEAEVGSYLADTDHTSLYMRGSTNSLAPCSISEAGSSF
WMSLLPPGLSDIVEKLVSIIQPHVTERCVNLRRACSVLLMGADGCGKVTAIKAVCRRLHL
HLLKVNCVTLCGDTAAACESKMKAAFHRAELHHPCVLLLRNLQLLGQRRDSTETDSRVAS
ALCQLIADAHSSVILVGCVRAQRDLSSDVMPAFVHQVVMESPTEEQRKAMLASLSQDLPL
GKDVNLAKIAKQTAGFILGDFCALLTGAGKAAHQRLLKSYYPHGASAQEEEDLCVFGVTI
MGVDFTTALEALQEARSQAIGAPKIPSVKWQDVGGLQQVKKEILDTIQLPLEHPELLSLG
LRRSGLLLYGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENIREVFCKART
ASPCIIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGLHSSSDVFVIGATNRPDLL
DQSLLRPGRFDKLVYVGINEDKESQLQVLKAILRKFKVDPSVSLSEIVERCPLQLTGADL
YALCSDAMMSAVKRRILHITEGLESEDATLTLCANDFNRALDILQPSVSEEELHKYKLIE
QKLTAK
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccgtaaagttcgtctgcctcgatcagtttccacctgatatgcaccccttg
caagcagtcgtccgtaagttacagttaactgaaatattttctaactccactggaacctca
tgcgcgctgttattatcctgtcaggaaactcagacgtccacaaagtcggcagttttagtt
tgcgcccacataacagctgaggagttccctgactgcacggtccatagtaacaccagcact
ctggcagtttatgtgtctaaagcttttctaagtcactacaattttcaggaagaaacgcca
ggaatcgcgcgtatcctacagcctctgcctttggacaagatagtaattggtgctcgcact
aagcagagcttcagatgggcatcttcggaagaattctccagttttctgctagttttggca
tcgtgtcctggacagactgtgttggtgaggagaggtgacactctgattttaccacaccat
cctctgcttggtgataacgccactctggtgcgtcagtatctctctgatttggtcgtgctg
gattgcacacctcttacccatggtatgatcactgtaaacactactgttgtagtctctgat
tgcagggaccttttgcatggccatggtgctttggactctgctgacagcagcgtaaccctc
agaccgtccagtgtgtccttgttcgtctctgatttcgcccactatgcgaacaatcttggc
ccggcgagctcgtttctgagtaaccggcttttgttcagctctggattcacagaggttctt
caagcccttgagtgcaggctggatgtgcaggtcacctgtgacaatgccaagctttgtaag
ttggcaaattttgggaggaaaatagggaagaatgcagaggtggacatggacagctccatt
tttgtgagcaaaaccctattgttaaagctagggttgtttaacggtgaatgggtcatggct
gcattgggaaaagtaaaaagatgttcgggaccagaaggggcacaaagtcctccagacaac
gaatgtggagcaaaggctatgactaagaccaaaggagatagtcatctggctaaaattgtg
gcttttattaagtcttcagacatggacgttagcgataatgcaggtttcatctcaccggta
ctgtggtttaacttgtccaatggagaaggaacacccgttggaagtaaaagcctcaaaata
aagagatggaacaaggcaccgttacagccaggacacaaactgtctgcaagtatatgctgt
tctgctgcaccgccatatgccaaagaactacacattgatgcagttatgtctccagattat
gactcccatgggccctttgacaatattctctttaagcacttcagcacacctcgacttgtc
cagcagggaagcatactgggtattccaacacaaggtcatctggattttttggaaaatagc
tctgatgaaatcacaagatggccagtcttatattttaaagtgaagcaggtgtctggcttt
tctgaggatgaagcagaagtcggatcatatcttgctgatacagaccacacctctctgtat
atgagaggttccaccaatagtctggctccgtgctccatctcagaggcaggttcatcattc
tggatgagtctcttgcctccaggactctctgacattgttgagaaattggtctccatcata
cagccgcacgtcactgaaaggtgtgtaaatttgaggcgagcctgctctgttctcctcatg
ggtgcagatggatgcgggaaggtcacagcgatcaaggcggtttgtcgaaggcttcatcta
cacctgctaaaggtgaactgcgtgaccctgtgtggagacactgcagctgcctgcgagtcc
aagatgaaggccgccttccacagagcggagctccatcacccctgtgtgcttctgctgagg
aacctgcagttacttggccagcggcgagacagcactgaaacagactccagagtagcttct
gcactctgccagctcatagctgatgcccactcaagtgtaatcttggttggctgcgtgcgt
gcccagcgggatttgtcctcagacgttatgccagcctttgtacaccaggttgtgatggag
agtcccacagaggagcagaggaaagccatgctagccagcctcagtcaagacctccctcta
gggaaagatgtcaatctggctaagatcgctaagcagactgcgggtttcattttgggagat
ttctgcgcactactcactggtgctggaaaagcagctcatcagcgcctgctgaagtcttat
tatccacatggggccagtgctcaggaagaggaggacctgtgtgtgtttggtgtgaccatt
atgggtgttgacttcaccacagcgctggaggctctgcaggaggcccggtcacaggcaatc
ggtgcaccaaagatcccatcagtgaagtggcaggatgtgggtggtctgcagcaggtcaag
aaggagatcctggacaccatccagctccctctggagcatccagagctgctctcactaggt
ctgagacgctctggcctgctgctctacggacctccaggcactggcaagactctgctagcc
aaagctgtggctactgagtgttctctaaccttcctcagtgtcaaaggtccagagctcatt
aacatgtatgttgggcagagcgaggaaaacatcagagaagtgttttgcaaagctaggact
gcatctccctgtattatcttcttcgatgagttggactctttggctcctaaccgaggccgc
agcggagactcaggaggggtgatggacagggtcgtgtcgcagctcttagctgagcttgat
ggcttgcattcatctagtgatgtctttgtgattggagcaactaaccggccagacttactc
gaccagtcgcttctcaggcccggcagatttgataaattagtgtacgttggcattaacgaa
gacaaggaatcacagctacaagtgctcaaggctatattacgaaagtttaaggtggatccc
agtgtcagtctgtcggaaatagtggagcgctgtccacttcagctcacaggagccgatcta
tatgcactctgctctgacgccatgatgtctgctgttaagaggaggattttgcacatcact
gaaggtctggagtcagaggatgctacgctcacgctgtgtgccaatgacttcaacagagct
ctggacatcctgcagccatcagtgtctgaggaggagctgcacaagtacaaactcatcgag
cagaaactcactgcaaagtaa
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