Ictalurus punctatus (channel catfish): 108271857
Help
Entry
108271857 CDS
T04658
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 1 isoform X1
KO
K11832
ubiquitin carboxyl-terminal hydrolase 1 [EC:
3.4.19.12
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
108271857
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ipu01002
]
108271857
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108271857
03400 DNA repair and recombination proteins [BR:
ipu03400
]
108271857
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108271857
Peptidases and inhibitors [BR:
ipu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108271857
Ubiquitin system [BR:
ipu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108271857
DNA repair and recombination proteins [BR:
ipu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
108271857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
108271857
NCBI-ProteinID:
XP_017335221
Ensembl:
ENSIPUG00000006489
UniProt:
A0A2D0RYH0
LinkDB
All DBs
Position
11:complement(19893470..19904530)
Genome browser
AA seq
781 aa
AA seq
DB search
MPGVQSEGAAVGVGSPVRKNRLSLKFLQRKETKRALDFNEPQAEESNAVEPADTTSCDQV
VPAPCPSSPPCGKRESLVPFVGLNNLGNTCYLNSILQVLYYCPGFKDVVKTLYRLSKLKE
QQKGDGAKSEEGDSCEDSMPVHMELLHSFHSLISSVEQLQSSFLFNPDKYNEGELATPPR
RILNTLRQLNPMYEGYLQHDAQEVLQCILAYIQEACDTIKKDIRPNPDEKPGECERITTG
GTTDETTPTREEEESSDGQLSGKRKSDTEVGNAKKKPKSQRKPKKSDEESRPFTRSKRKS
SGDVVGNSLGDQRDVAEKDKAEKEGGSNTEDEKIEGTAKEANKRKKRMKLSWLKPSGKQP
SIFSKFRSMGRISSHVGDGAESKDQDTSSSEQHHGEATPGSGKTILNPTAPKTEAELLGL
DMLKQLFQGQLVLRTRCLECESYTERREDFQDISVPVQEDETSCSQASSEISPDPKPERK
TLRWAISQFASVERIVGEDKYFCETCHHYTEAERSLLFDKTPDVITIHLKCFAASGSEMD
PYAGLSKVNTPLLTPLKLSLEEWSTRPSTSHQEHHYKLFAVVMHSGVTISSGHYTTYIRM
TDLHHSKIELQPEDKPQKEEDREMKPLKKEEVSQPDYYDDGEVSFSLSSKAKNTINGTSL
SSKAGGKRSTEGVGLLGGQRSISSYEISTSKQPAYAGSPAQNGLVKKEREEEIDGVKEES
RLSLDTALQNLLDYEGKWMLFDDSEVRLFEEEEFLRACSPETCSTSTPYLLFYKKVSGQM
K
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgccaggtgtgcagagcgagggagctgcagtaggtgtggggagtccggtccggaaaaac
cgtctgtctctaaagttcctgcaaaggaaagaaaccaagcgcgctctcgacttcaacgag
cctcaggctgaggaatccaacgctgtagaaccagcagacaccacaagctgtgatcaggtt
gtgccagcgccttgtccctcatctcctccctgtggaaaaagagagagccttgtaccattt
gttggccttaacaatctgggaaacacctgctaccttaacagcatccttcaggtcctttat
tattgccctgggtttaaagatgttgttaagacgttgtatcggttgtccaagttaaaggag
caacagaaaggagatggtgccaaaagtgaagagggagactcgtgtgaagactcgatgcct
gttcacatggaattactgcacagcttccacagtttaatatcttcagtggagcagctgcag
tccagtttcctgtttaacccagacaaatataacgaaggcgagctggccacacccccacgc
agaatactcaacacactcagacaactgaatcctatgtatgaagggtatctgcagcatgat
gcacaggaggtactgcagtgcatcctcgcatatatccaggaggcctgtgacaccattaag
aaagacattagacccaacccagatgaaaaaccaggagagtgtgagcgcatcacgacaggc
gggacgacggacgagacgacacctacccgagaggaagaggagagctctgatggacagctg
agtgggaaaaggaagagcgacacagaagtgggaaatgccaagaagaagcccaagtctcag
cgcaaacccaagaaaagcgatgaggagagcagacctttcacgcgatcaaagagaaagtcc
tctggtgacgtggttggaaattctctcggtgaccagagggatgtggcagagaaagacaag
gcggagaaagagggaggaagtaacacagaggatgagaagatcgaaggaaccgcaaaggag
gcgaataaaaggaagaagaggatgaaactgagctggctgaaaccttcagggaagcaaccg
agtattttctccaaattccgcagcatggggcgaatcagctctcatgtgggagacggagcg
gagagcaaggaccaggacacgagcagcagtgagcagcaccatggtgaagccactcccggt
agcgggaagaccatactgaatccaactgcaccaaagacggaagcagaactgctgggcttg
gatatgctgaagcagctgttccagggtcagctggtgctgaggacacggtgcctggagtgc
gagagttacactgagaggagagaggacttccaggacataagtgtaccagtgcaagaggat
gagaccagctgctcacaggctagttcggagatttccccagatcctaagcccgaacggaag
actctgaggtgggcgatctctcagtttgcgtcagtagagcggatcgtcggcgaggataaa
tatttctgtgagacctgtcaccactacacagaggcggagaggagtcttctgttcgacaag
acccctgacgtcatcaccattcacctcaagtgtttcgcagccagtggctcagagatggac
ccgtatgctggactgtcaaaggtgaacacgcccctcctcactcccctcaaactttcccta
gaggaatggagcacacgaccctccacttcccaccaggagcaccattacaagctctttgct
gtggtcatgcacagtggcgtgaccattagcagcggccattacaccacctacatccgcatg
acagaccttcaccacagcaagatcgagctccagcctgaggataagcctcagaaagaggaa
gaccgggaaatgaaaccacttaagaaggaagaggtttcacaacccgattattatgatgat
ggtgaggtgtccttcagcttaagctccaaagcgaagaacacgattaacggcacgagtttg
tctagcaaagccggaggaaagaggtctacagaaggggtcggtctactgggaggtcagaga
agtatctcaagctacgagatcagcaccagcaagcagcccgcttacgccggttctcctgcg
cagaacggactggtgaagaaggaaagggaggaagaaatcgatggagtgaaagaagagagt
cggttgagcttggacactgctttacagaaccttctggactatgaagggaagtggatgctg
tttgatgactcagaggtgaggctgtttgaggaagaagagttcctgcgtgcatgttctcct
gagacctgttccacctccacaccttacctcctcttctacaagaaggtctcaggacaaatg
aaatga
DBGET
integrated database retrieval system
