Ictalurus punctatus (channel catfish): 108272802
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Entry
108272802 CDS
T04658
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6 homolog
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108272802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ipu03009
]
108272802
Ribosome biogenesis [BR:
ipu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
108272802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U3_assoc_6
TPR_19
Motif
Other DBs
NCBI-GeneID:
108272802
NCBI-ProteinID:
XP_017337040
Ensembl:
ENSIPUG00000022587
UniProt:
W5UE51
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All DBs
Position
12:complement(16165192..16176937)
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AA seq
594 aa
AA seq
DB search
MADLVQQRIEDRIPALEQLERVGLFTKKEVKSILKRSTALEYKLHRSVQSKDDYITYIQY
EINVLELIKKRRARIGYHFKREDIEFPMIQRINSVFRRATSKWQEDVQLWLSQVAFCKQW
GMKGQLSKVFSSMLAIHPDKPNLWIMAAKCEMEDRNSSESARHLFLRALRFHPENKKVYQ
EYLRMELMHAEKLRKQQQELERAQIDIGEYEFSPEILSGRLAEVVYKDATQKIKGAEFML
SLLQIAAIFDFTKELQDSILQDLQSQHTDDSVTWDFMARRELEVGGTPELHSAQSRAADI
RSREERCGAVYEEGLKNLNTEPMWTCYVTFCLDRFKRKTNVIELKEKRRERLLGVLQRAH
DASLLQEAFYRTWLEVLISSEKTQAAIQVAIAAAKRFSKSVEMWTLSLQTLVRLESEEAG
PLFQEAMKLVNPKDTLPLWKLQAEWSITSQPPDETEALFQKALLTHVPAVSTAMKEIYLQ
WAYRTGGYKKARKLFTSLHEHRPFSKTFFTTMVQIEKEQEKPKMSHLRDYYERALREFGS
SDEDLWMDYIKEELGIHGSAENCGKLHWRAMKNLTGESVQRFTTQYTLLQTGHI
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggcggatttggtgcagcagcggattgaggaccggatcccggcgctggagcagctggag
agagtcgggctgttcaccaagaaagaagtgaaatcgatactgaaaagatccacagctctg
gaatataaacttcacagatccgtgcagagtaaagatgattacattacctacatacagtat
gaaataaacgtgctggagctcatcaagaagagaagagccagaatcggctaccacttcaaa
agggaggacattgagttccccatgatccagagaatcaacagcgtgttcaggagggcaacg
tcaaagtggcaggaggatgtgcagctgtggctctctcaggttgccttctgtaagcaatgg
gggatgaagggtcaactcagcaaggtcttctcctccatgctggccatccaccccgacaaa
cccaatttatggatcatggcagccaagtgtgagatggaggacaggaattcgtctgaaagc
gctcgccacctctttctcagagcgcttcgcttccatccggagaataaaaaggtttaccag
gagtatttacggatggagctgatgcacgccgagaaactgcgcaaacaacagcaggaactg
gaacgcgcccaaattgacatcggtgagtacgagttttctccggagatcttgagtggcagg
ctggctgaagttgtgtacaaagatgccacgcagaaaattaaaggagcggagtttatgctc
tcactgctgcagatcgctgccatttttgacttcacgaaagagctgcaggactccatcctc
caggatctgcagagtcagcacactgatgactccgtgacctgggacttcatggctcgtcgg
gagctggaggtgggcgggactcccgaactgcactcagcccagagtcgtgccgctgacatc
aggagcagagaggagcgttgcggtgctgtctatgaggagggactcaagaacctcaacaca
gaacccatgtggacgtgttatgtaacgttctgtttggaccgatttaagaggaaaacgaac
gtcatcgagctgaaggaaaagagaagagagcggctgcttggtgtccttcagagagctcat
gatgcctcactgctgcaggaggctttctacaggacctggctggaggtcttgatctcatcc
gagaaaacacaagccgccattcaggttgccatagcagccgctaaacgcttcagtaaatcg
gtagagatgtggacgttgagcttgcagacattggtacgtttagagagcgaggaggcgggg
cctctgttccaggaagcaatgaagcttgtgaatcccaaggacactttgccactgtggaag
cttcaggccgagtggagcatcacgtcgcagcctccagatgaaacagaagctctgtttcag
aaagctttgttaacccatgtcccggccgtttccacggcgatgaaggaaatctacctgcag
tgggcctacaggactggtggctacaaaaaagccaggaaacttttcaccagcctgcacgag
caccgacctttctccaaaaccttcttcaccacgatggttcagatcgagaaagaacaagag
aagccgaagatgagtcacctgagagattactacgagcgagctctgcgcgagtttggctcc
tccgacgaagatctgtggatggattacatcaaagaggagctgggtatccatggcagtgct
gagaattgtgggaaactccactggagggccatgaagaacctgaccggagagagtgtgcag
cgcttcacaacacaatacacactgctgcagaccggccacatctag
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