Ictalurus punctatus (channel catfish): 108273880
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Entry
108273880 CDS
T04658
Name
(RefSeq) dedicator of cytokinesis protein 1 isoform X1
KO
K13708
dedicator of cytokinesis protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04148
Efferocytosis
ipu04510
Focal adhesion
ipu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108273880
09144 Cellular community - eukaryotes
04510 Focal adhesion
108273880
09142 Cell motility
04810 Regulation of actin cytoskeleton
108273880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108273880
Membrane trafficking [BR:
ipu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108273880
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DOCK_N
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_A
DHR-2_Lobe_B
SH3_1
SH3_9
SH3_2
SR-25
Motif
Other DBs
NCBI-GeneID:
108273880
NCBI-ProteinID:
XP_017339011
Ensembl:
ENSIPUG00000005848
UniProt:
A0A2D0S996
LinkDB
All DBs
Position
13:complement(22621365..22905657)
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AA seq
1882 aa
AA seq
DB search
MSRWIPTKKEKYGVAIYNYDARGEEELSLQIGDTVHILETYEGWYRGHRLRRRSKKGIFP
ACYIHLKEASVEGSGPKETVIPTELPLVHEVTTTLREWASIWRDLYVGDKREMFNTVRDM
IYDLIEWRSQILSGTLPQDELSELKQKVTSKIDYGNKVLDQDLVVRDKDGNILDPDLTST
ISLFRAHEAASRQIDERLQEEKSQRQNLDRQAKFASTPSFALFVTLKNVVCKIGEDAEVL
MSLYDPNEYKFISENYLVRWSSSGLVKDIDQLHNLRAVLTDLGSEDLKREKISFVCQIVR
VGRMELRDNNTKKLTSGLRRPFGVAVMDVTDIITGKMDDEDKQHFIPFQPLALGDAIRHR
QLNISRFSPRVAGENDFLQSVINKVISAKEVNHKGQGLWVTLKLLPGDIHQIRKDFPHLV
DRSTAVARKMGFPEIIMPGDVRNDIYVTLTHGDFDKGSKTTPKNVEVTMSVYDEEGKRLE
NVIFPGAGDDGITEYKSVIYYQVKQPRWFETIKVAIPIEDVNRSHLRFTFKHRSSQDYKD
RSEKIFALSFVKLMRYDGTTLRDGEHDLIVYKAEAKKLEDSSLYLSLPATKLELEEKGHF
PTGKGSQSLGNCTISKDSFQIATLVCSTKLTQNVDLLGLLKWRSNTNLLQQNLRQLMKVD
GGEVVKFLQDTLDALFNIMMENSDSDTFDTLVFDALVFIIGLIADRKFQHFNPVLETYIW
KHFSATLAYTKLTKVLKNYVDHAEKLTDQLLKAMKALEYIFKFIVRSRVLFNQLYENKGE
SDFMESVRSLFTSFSIMMNSDVESTSMVKGAALKYVPTIVNDVKLVFDPKELSKLFSEFI
LKVPPGRLVKQKLYCMIDIVHSDLFTQHDCREILLPLMTDQLKFHLEQHEELEACCQLLS
NILEVLYRSDVGPTQWHIQIIMEKLLRTVNRTVISLGRDSPLIGSFVASMTATLRQMDDY
HYAHLINTFGKMRTDVVDFLMETFIMFKDLIGKNVYPTDWVIMNMMQNKVFLRAINQYAA
VLSKKFLDQTNFELQLWNNYFHLAVAFLTQESLQLENFSSDKRAKIFQKYQDMRRQIGFE
IRDMWYNLGPHKIKFIPEMVGPILEMTLVPEIELRKATIPIFFDMMQCEFHFTRSFQRFE
NEIITKLDHEVEGGRGDEQYKILFQKILLEHCRKHKYLAKNGENFVSLVVRLLERLLDYR
TIMHDESKENRMSCTVNVLNFYKEIEREEMYIRYLYKLCDLHKECDNYTEAAYTLLLHAK
LLKWSEDACAAHLTQRDGYHASTQGQLKDQLYQEIINYFDKGKMWEEAIILGKELAEQYE
NEMFDFEQLSALLRKQAQFYENIVKVIRPKPDYFAVGYYGQGFPSFLRNKMFIYRGKEYE
RREDFEARLLTQFPNAEKMKTTTAPNDELRLSSGQYIQCFTVKPLLELAPKFQNKPVCEQ
IVSFYTINEVMKFQYSRPIRKGEKDPDNEFANMWIERTTYVTAYKLPGILRWFEVISVSA
EEISPLENAIETMQLTNEKINNMVQRHLSDPNLPINPLSMLLNGIVDPAVMGGFANYEKA
FFTEKYIQEHPEDKEKIDKLKDLIAWQIPYLAEGVRIHGEKVTEALRPFHDRLEACFKQL
KEKVEKQYGVKSLPPMADERRGTRPRSMVRSFTMPSSQRPLSVASVTSLSSDNSPSRPGS
DGFALEPLLPKKQHFKSQDKLDRDEPEKDRKEKKKEKRNSKHQEIFDKELKATDIPMQPT
EAVILSETISPLRPQRPKSQVLNVLGDKRLSVSPGPAVPQTTSTLPPPITPRVKLTFSML
SSSNLELNGMGYGETPPPLPIKSGMGDYGNLMENPELASPTTPPPHPLHQRHLPPPLPSK
TPPPPPPKATRKQTSIDSGIVQ
NT seq
5649 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgctggattcctaccaagaaggaaaagtacggcgtcgcgatttataactatgat
gctcgcggtgaggaggagctttcactgcagattggagacacagtacatatactggaaacg
tatgaaggctggtacagaggacaccggctgaggaggcgctcaaaaaagggcatatttcct
gcctgttatatacacctgaaagaggcttcagttgaaggcagtggaccaaaggagacggtc
attcccacagagctgcctctggtgcatgaggtcaccaccactctgagagaatgggcgtcc
atctggagggacttgtatgtgggtgacaagcgtgagatgtttaataccgttcgtgacatg
atctatgatctcatcgagtggcgatcacagattctgtcaggaactcttccacaggacgag
ctctccgaactcaagcagaaagtcacctccaagatcgactatggcaacaaggttttggat
caggatctggtggtgagagataaggatgggaacattttggacccagacctcaccagcacc
atcagcctgttccgagcacacgaggctgcatccagacagatcgatgaacgcctccaggag
gagaagtctcagagacagaatctggatcgacaggccaagtttgcctccacgccatccttc
gctctgtttgtgacgctaaagaacgtggtgtgtaagatcggagaggatgccgaggtgctc
atgtccctctacgaccccaacgagtacaagttcatcagtgagaactaccttgtccggtgg
tccagctctggtctggtcaaagacatcgatcagcttcacaacctgcgagccgtgctcact
gatctgggcagtgaggatctgaaacgggagaaaatcagttttgtctgtcagatcgtccga
gttgggcgaatggaactgcgagacaacaacactaaaaagttgacgtccgggctccgaagg
cccttcggagtggcagtaatggatgttaccgatatcatcactggcaaaatggatgacgaa
gacaagcagcacttcattccttttcagccgcttgcgctgggtgacgccatccgccacagg
cagctgaacatctcccgtttttcacccagggtggcaggagagaacgactttctccagagc
gtcatcaacaaggtcatcagcgccaaagaggtcaatcataagggccaagggctttgggtc
acactgaagctgttacccggtgatatccatcagatccggaaggatttcccccacctggtg
gaccgctccactgccgttgcccgcaaaatgggcttcccagagatcatcatgccaggtgac
gttcgtaatgacatttatgtgacgctgactcacggggacttcgataaaggcagtaaaacc
acgcccaagaacgtggaagtcaccatgtctgtgtatgatgaggaaggcaagagactggag
aacgtgatcttccccggtgccggagatgatggaattacagagtacaagtctgtgatttac
tatcaggtcaaacagccgcgctggttcgagaccatcaaggtggctatccctattgaggat
gttaacaggagtcatctgcgattcactttcaaacatcgctcttctcaggattacaaagac
aggtcagagaagatctttgccttgtcttttgtgaagctgatgagatatgacggcactaca
ctcagggatggagaacacgatctgatcgtctacaaggctgaggctaagaagctggaggac
tcctctctctatctgagcctgccagccaccaagctcgagctagaggagaaaggccacttc
cccacgggcaagggctcacagagcctgggcaactgtaccatcagcaaggactccttccag
attgccactctggtgtgttccaccaagctcacgcagaacgtggatctgcttggtttgctg
aaatggcgctcgaacaccaacctgctccaacaaaacctgcgtcagctcatgaaggtggac
ggaggagaggtggtcaagttcttgcaggacaccctggatgctttattcaacataatgatg
gaaaactctgacagtgacacgtttgacacactggtgtttgatgccttggtgtttataatt
ggattgatagcagacagaaagttccagcattttaaccctgttctggagacgtacatctgg
aaacacttcagtgccaccctggcatacacgaaactgacaaaggttttgaagaactacgtg
gaccatgcggagaagttgacagaccagcttctgaaggccatgaaggctctggagtacatc
tttaagttcatcgtgcgatctcgagtcctcttcaaccagctgtatgagaataaaggagaa
tcagacttcatggagtcagtgaggagtctcttcacatcattcagcatcatgatgaacagt
gacgttgagagcaccagcatggtcaagggtgcagcgttgaaatatgttcctaccatcgtc
aatgacgtcaaactggtctttgatccaaaagagctcagtaaactgttcagcgagttcatc
ctgaaggtgccaccaggtcgcttggtcaagcagaagctctactgcatgatcgacatcgtc
cacagcgacctcttcacacagcatgactgcagagagatccttctgccacttatgactgat
cagctgaagtttcacttggagcagcatgaggagctggaggcctgctgccagctgctcagc
aacatcctggaggtgttgtacaggagtgatgtgggtccgacccaatggcatattcagatc
attatggagaagttgttgaggaccgtgaacaggaccgtgatctcactgggacgcgactct
cctctcattggcagttttgtggcgagtatgacggccacactccgacagatggacgactat
cactacgctcacctgatcaacaccttcggcaagatgaggacagatgtggtggacttctta
atggaaacatttatcatgttcaaagacctcatcgggaagaatgtctaccccactgactgg
gtcatcatgaacatgatgcagaacaaagtcttcctgcgagccatcaatcaatacgcagcc
gtgctgagcaagaagttcctggaccagaccaacttcgagcttcagttgtggaataactac
ttccacctggccgtggccttccttacccaggagtctctgcagctggagaacttctcaagt
gacaaacgagcgaaaatctttcagaagtatcaggacatgaggcgccagattggctttgag
atccgggacatgtggtacaacctgggtccacacaagatcaagttcatccctgagatggtg
gggcccattctggagatgacgcttgttccagagattgagctgcgaaaagcaactatcccc
atcttctttgacatgatgcagtgcgagttccacttcacgcgcagtttccaaaggtttgaa
aacgagatcatcacgaagctggatcacgaggtggaaggaggccgcggagatgagcagtac
aaaattctcttccagaagatcctcttggagcactgtaggaagcataaatacctggcaaag
aacggcgagaactttgtgagtctggtggtgcgtctgctggagaggttgctggactacagg
actatcatgcacgatgagagcaaagagaatcgcatgagctgtacagttaacgtcttgaat
ttctacaaggagattgagagggaggagatgtacatcaggtacctgtataaattatgtgac
ctgcataaggagtgtgataactacactgaggctgcctacactctattgctgcacgccaaa
cttctgaagtggtcagaagacgcgtgtgcagctcacctgactcagagagatggatatcac
gcgagcactcaaggccagctcaaggaccagctttaccaggagattatcaactacttcgac
aagggaaagatgtgggaggaggccatcatactggggaaggagcttgccgaacagtacgag
aacgagatgtttgactttgagcagctcagtgctttactgaggaagcaggcacagttctac
gagaatatagtgaaggtgatcaggcccaaaccggattactttgctgtgggttattatggc
cagggtttcccttcattcctcaggaataagatgtttatctaccggggaaaagagtacgag
cggagggaggattttgaggcgaggctactcacacagttccccaatgctgagaagatgaag
accaccactgcccccaacgatgagctccgcctttcctctggccagtatattcagtgtttc
acagtgaagccattactcgagcttgctcccaaattccaaaacaagcctgtgtgtgagcag
atagtcagcttttacaccatcaatgaggtcatgaagttccagtactccagacccatccgc
aaaggcgagaaagatccggataacgaatttgctaatatgtggatcgaaaggactacatat
gtcacggcctacaagctccctgggatcctgcgctggtttgaagtcatctctgtgtctgca
gaagagattagccctctggagaacgccatagagaccatgcaactgaccaatgagaagatc
aacaacatggtccagcgccatctcagtgaccccaaccttcccatcaaccccctgtccatg
ctgctcaatggcattgtggaccccgctgtcatgggtggctttgctaactatgaaaaggca
tttttcacagagaagtacatccaggagcaccccgaggacaaggagaagattgacaagctg
aaggacctgatcgcctggcagatcccatacctggcagaaggtgtgcgtattcacggtgag
aaggtgaccgaggccctgcgaccattccacgaccgtcttgaagcatgcttcaaacagtta
aaagagaaggtggagaaacagtacggtgtgaaatcgctgcccccaatggcggatgagcgt
cgtggcacacgtccgcggtcgatggtgcgctccttcaccatgccctcatctcagaggccg
ctgtctgtcgcgtctgtcacctccttatcatcagacaactcgccatcaagaccaggatct
gatggttttgctctggagcccctcttgccgaagaagcagcactttaagtctcaggacaag
ctggaccgggatgaacccgaaaaagacaggaaggagaagaagaaagaaaaaagaaacagc
aaacaccaagagatctttgacaaggagctgaaggccaccgacattcccatgcagcccact
gaggcggtcatcctgtccgagacgatcagtccactgcgtccccagaggccaaagagtcaa
gtgctaaacgtgttgggagataagaggctgtctgtgtccccgggacctgctgttcctcag
actacttctactcttcctcctcccatcactccaagggtcaagctcaccttcagcatgctc
tcctcctccaatctagaactgaatgggatgggctatggtgagactccacctcctctgccg
atcaaaagcggtatgggtgattatgggaacctgatggaaaacccagagctggccagccca
accacacctcctcctcatcctctacatcagcggcatctgccccctccactgccgagtaaa
accccaccccctcctcctccaaaagccacaaggaagcagacctccattgactcggggatt
gtgcagtga
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integrated database retrieval system
