Ictalurus punctatus (channel catfish): 108274553
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Entry
108274553 CDS
T04658
Name
(RefSeq) tumor necrosis factor receptor superfamily member 6B
KO
K05148
tumor necrosis factor receptor superfamily member 11B
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108274553
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ipu04050
]
108274553
Cytokine receptors [BR:
ipu04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
108274553
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Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death_3
hEGF
Motif
Other DBs
NCBI-GeneID:
108274553
NCBI-ProteinID:
XP_047015919
UniProt:
A0A979F7S5
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Position
14:23616703..23620590
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AA seq
330 aa
AA seq
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MDKVFLEVTNDASLQSVLKRGTRSSSLSTELGRDARAEAHMATSEFILTVLVLYSSTASL
VIAQNEQNETTYQRKLPSGKIVTCDRCPPGSHLQKHCTDTQRTVCRPCDAGFYTEFSNYI
YDCLPCDWCSSDQTEAKKCTSSSNRVCQCKEGFYWNSHFCQQHTVCQKGYGVKVKGTPHT
DTECERCTAGYYAAENTPCVPHTPCKSEEKLLFSGTSSVDNVCVSCNSITQDGVLKLLKQ
QVIEIFFKIQNTRKLHRICRNLNVKDGGFQSSRIHDHCIQNLQRWLNEATEQEVLSLPDK
LHKHEGISKNIKDSIKRIHDEINLCRNTLL
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggataaagttttcctggaagtgactaatgacgcatcacttcagagcgtattaaaaaga
ggcacgagatcctcctccttgtcaacagaactggggcgagacgcgcgcgcagaggcacac
atggcaaccagcgagtttatcctcactgttttagtgctatacagcagcacagcatccttg
gtgattgctcaaaatgagcaaaatgagaccacgtaccaacgcaagcttccctccggcaag
atcgtgacgtgcgaccgctgccctccaggttcccatctgcagaagcactgcacagacacg
cagcgtaccgtgtgccggccgtgcgacgcaggattctacaccgagttctcaaactacatc
tatgactgtctgccatgcgactggtgttcttcagatcagaccgaagcaaagaagtgcacg
agctccagtaaccgtgtgtgtcagtgcaaggaaggcttttactggaactcgcacttctgc
cagcagcacacggtgtgtcagaagggatacggagtcaaagtaaaagggactccacacaca
gacacggagtgtgagcgttgcacggccggatactacgcagccgaaaacacgccgtgcgtt
ccacacacaccgtgcaaatcagaagagaagcttctgttctccggcaccagctctgtggac
aacgtttgtgttagctgcaacagtatcacacaggatggtgtgttaaaactcctcaagcag
caagtcatagaaatcttcttcaagattcagaatactcgaaagctacatcgtatctgtagg
aacttaaatgtaaaggacggtggatttcagtcctccagaattcatgaccactgtattcag
aatctgcagcggtggcttaacgaggctacagagcaggaggtcctcagccttcccgataag
ctgcacaagcatgaaggtatatccaagaacatcaaggacagcattaagaggatccatgat
gaaatcaatctgtgcagaaacactttgctttaa
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