Ictalurus punctatus (channel catfish): 108277000
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Entry
108277000 CDS
T04658
Symbol
setd1ba
Name
(RefSeq) histone-lysine N-methyltransferase SETD1B-A isoform X1
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00310
Lysine degradation
ipu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
108277000 (setd1ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108277000 (setd1ba)
Enzymes [BR:
ipu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
108277000 (setd1ba)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
108277000 (setd1ba)
HMT complexes
COMPASS/SET1 complex
108277000 (setd1ba)
COMPASS/SET1 complex (yeast)
108277000 (setd1ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N-SET
SET
RRM_1
Motif
Other DBs
NCBI-GeneID:
108277000
NCBI-ProteinID:
XP_053542563
Ensembl:
ENSIPUG00000024741
UniProt:
A0A9F7RRY3
LinkDB
All DBs
Position
16:21236937..21263157
Genome browser
AA seq
1728 aa
AA seq
DB search
MSRPGERSRGDEDHGKRQSSSLANGGTENSSAEKRREHHWRSWKLIIDPALRKGSHKLYR
YDGHSFNIPNAGIPPVDMVRDPRIGRLWTRYKETDLPVPKFKIDECYIGRVPPKEVTFAR
LNDNIREGFLTDMCQKYGEIEEVEILYNPKNKKHLGIAKVVFGSVKAAKDAVQNLHNTSV
MGNIIHAELDPKGENRLRYVQRLITGSFTPLTVPVGDDDACEVSPRSLAEALLSSCEPLR
RLSEGGSTSTSTPLSMDTAYSSLRQDATPQSQTTPITPRPSGTPFSQDSAYSGRQATPTF
QRSRRHETKFQDAYNRRPERHYVHGGYRGNAEKPNPPPEAPPPPVTPNFKPSFSPYQPPM
PPVYPPAEPPFQPSDYRHPPPQAPLPTTPEFHPEPPPMPEETRPATPTSCPSPSPDTPTL
EAERHSLDSRIEMLLKEKRTKLPFLNEGGDSDGEVRMEGSPISSSSSQLSPIPPSSAVLR
TPRPPSTGLEDISPTPLPDSDDDEPIPGTASATHLPPSASPSNTHNVAGPHTPTDKVDTG
NQSSGEDMEISDDEMPGTPTSSDCAKGIVMNSAVSPIAPQSMPLPPPGFPPLPPPQPAYP
MHPAHMPPHLPAPPPMLPPMHPYPPGMMAMMPVELMSCLPQWGNVHMSFQMQTQMLSRIA
QSQRPYPFPQFLGGTATANAGAMQFGGPYPHMSMVNTPGGGHGQPWPLPSVPKFNPSVPP
PGYEPKKEDPHKATVDGVLMVIVKELKAIMKRDLNRKMVEVVAFRAFDEWWERKEHSAKA
TSTPVKTGEGKEDDKERVKPKETLSSSLLETWSKGEGLGYEGMGLGIGLRGAIRLPSFKV
KRKEPPDPVSTGESKRARPSTPVDDELEDEESERADAPSDGTRVDDASSTKRRHARPVEL
DSEGEEEEDEEEEETGREESVSEREDEADVDVSERLSTSKEAEKDNEDDDERGSGSESES
SSSDSSDEESTSSSSSQSDSDFSESDSSSDYESSSDEEEEEEEEEEKKAQEVTMDTDDED
REVVPSSLVSSSSSPLLSSEEEEEAEMKAPSTPAAPVKEECEVAQLEAEEAVTTITAAQD
NLRRLSPKGIKEESDIDLEVRKTEPNLEGVGTLRPPTPPHAEEEEVPRTPGRDVPAPSEV
ETSTIHLPLPPAHSVLPPPRLSSDEDVPRTPGRDLPHRFNKSQSSETAPTTPTIPATPST
PGEAPPTGSSVSLNSPFPYPLLSAGIPPTPGRDLNFTPVFPDSPASLPLQRKSSSEKPLF
KEPGSATSCSSSPLPVVPVSCLDAATVPINQHVPLIELPVPDDSASAKKKLGRPRKPAVV
EPEDAQEPPEAMMLLPSDLTLKDTLPECEAIPGVPRGSEGSAALAQKEREEKAEVKHEEI
KKDIKEEVQDVEQTVLFEEPLQKTRGQRRSWETLLLSMHLPVRSPPRRSFLPRSEFEEMT
ILYDIWNEGIDEEDVRYLKITYEKMLQQDNSHDWLNDTLWVPHPPTSSGSLPGVKKKRRE
DGMRDHVTGCARSEGYYKIDKKDKMKYLNSTRLQSDEPDKDMQGRMIPAQPHASTRAGSE
RRSEQRRLLSSFSCDSDLLKFNQLKFRKKKIRFCKSHIHDWGLFAMEPIAADEMVIEYVG
QNIRQVIADMREKRYEEEGIGSSYMFRVDHDTIIDATKCGNFARFINHSCNPNCYAKVIT
VESQKKIVIYSRQPINVNEEITYDYKFPIEDEKIPCLCGAENCRGTLN
NT seq
5187 nt
NT seq
+upstream
nt +downstream
nt
atgtccagacctggagagagaagcagaggagatgaagatcacggcaaaaggcagagttca
agtttggcgaacggcggcacggagaacagctcggcagagaagcggagagagcaccactgg
agaagttggaagttgattattgacccggcgctgagaaagggctcacacaaactctaccga
tacgatggacacagtttcaacataccgaatgccgggatccccccggtggacatggtcagg
gatccccggatcggtcgcctgtggacccggtacaaggagaccgacctgcccgtgcccaag
tttaagattgatgaatgctacatcgggcgcgtgcctccgaaggaagtgacattcgcaagg
ctgaacgacaacatccgggagggtttccttaccgacatgtgccagaaatacggcgaaatc
gaggaggtggaaattctgtacaatccgaaaaataagaagcacctgggcatcgctaaagtt
gtgtttggctcagtgaaagctgccaaggacgcggtgcagaacctgcacaacacctctgtg
atggggaacatcatccacgcagagctcgaccccaaaggtgagaaccggctgcgttatgtc
cagagactgataactgggagcttcacgcccctgaccgtgccagtgggagacgatgatgcg
tgtgaggtgtcaccgcgcagcctggccgaggcgctgctgtcgtcctgtgagccgttacgt
cgtctctctgaaggtgggtccaccagcacaagcaccccgctctccatggacacggcatat
tcaagccttagacaggatgctacaccccaatcacagacaacgcccatcacgccccgccct
tctggcacacccttctctcaggactctgcctactctggcaggcaggccacgcccaccttc
cagcgttcccggaggcacgagaccaaattccaggacgcatacaaccgccgtccggagagg
cattatgtccacgggggttaccgtggcaatgcagagaagccaaacccaccacctgaagct
ccacccccacctgtcacacccaattttaagccttctttctcgccgtaccagccccccatg
ccccccgtttaccctcctgctgagccaccctttcaaccatcggattacagacaccctcct
cctcaagccccgctccctactacgcccgaatttcacccagaaccgcctcctatgcccgag
gaaacacggcctgccacgccgacctcctgcccctccccttccccggacacacccactctg
gaggcagagcgtcacagcctggactcacgcattgagatgctgctgaaggaaaaacgcaca
aagttgccattcctgaacgaaggtggagactcggatggagaggtgcgcatggagggcagt
cccatctcctcctcctcttctcagctatccccgatcccgccatcctctgccgtcctacgc
acaccccgccctccaagcaccggccttgaggatatcagccccactccactgcccgactct
gatgacgacgagcccatcccaggcactgcctccgctacgcacctcccaccgagtgcctca
ccgtcaaacacgcacaatgttgcggggccacataccccaaccgacaaagtggatacgggt
aaccagtcgtcaggggaggatatggaaatctctgatgatgagatgccaggcacgcccacc
tccagcgactgcgctaagggcattgtgatgaactcggccgtgtctccgatagctcctcag
tccatgccgctcccaccgcctggcttcccccctctaccccctccacagcctgcttatccc
atgcaccctgctcacatgcccccccatctccctgccccacctccaatgctgcccccaatg
cacccgtatccaccgggcatgatggccatgatgcctgtggagctgatgagctgtttgccg
cagtggggcaacgtgcacatgtcattccagatgcagacacaaatgctgagccgcatagca
cagagccagcgtccttaccccttcccacagttcctaggaggaacggcaacggcaaatgca
ggtgccatgcagttcggcggtccctacccacacatgtccatggtgaacactccgggtggt
ggacacgggcagccctggcctttacccagtgtgcccaagtttaacccgtctgtgccacca
cccggctatgagcccaagaaagaagacccacacaaagccacggtggacggcgtgctcatg
gtcattgtcaaagagctgaaggccatcatgaagagagacctcaaccgcaagatggtagaa
gtggtggccttcagggcctttgatgaatggtgggagaggaaggagcactctgccaaggcg
acgtccaccccagtgaagaccggcgagggtaaggaagacgataaggagcgagtgaaaccg
aaagagacgttgtcatccagtctgttggagacatggagtaaaggcgagggtctcggttac
gagggcatgggtctggggatcggcctgagaggtgccatccgccttccgtccttcaaggtg
aagaggaaagagcctccagaccccgtctccacaggagagagtaagagagctcggccgtcc
acgcctgtagacgatgagctggaggatgaagagtcagaaagagcagatgccccctcagac
ggcacccgagtggatgacgcatcctctaccaagcgaaggcacgcccgtcctgtggagctg
gacagtgaaggagaggaggaagaggacgaggaagaggaggagacgggcagggaggagtct
gtgtccgaacgagaggacgaggccgatgtagacgtctcggagagactgtccactagcaag
gaggcagaaaaggataacgaagatgatgatgagcgcgggagcgggtctgagagtgagagc
agttcatctgactcgtctgacgaagaatccaccagctcatcatcttctcagtctgactct
gacttctccgagagtgacagctcttccgactacgagtccagctcagatgaggaagaggag
gaggaggaggaggaggagaaaaaagcacaggaggtcaccatggacacagacgatgaagac
agggaagtagtgccgtcgtcattggtgtcttcctcgtcctcacctttgttgtcctctgag
gaagaggaggaggcagagatgaaggctcccagcacacctgctgctcctgtgaaagaggaa
tgtgaggtggcacagctcgaggcagaggaggcagtgaccaccatcactgctgctcaggac
aatctgaggcggctgtcccctaaaggaatcaaagaagagtcggacattgatctggaggta
agaaagacagagcccaacctggagggcgtggggaccctgaggcctccaacaccaccccat
gcagaggaagaggaggtgcctcgaactccaggtcgtgatgtccctgccccttcagaggtg
gagacatccacaattcacctgccccttccccctgctcattctgtcctcccgcccccacgc
ctctcgagcgacgaggacgttccccgcacaccgggccgtgaccttccccaccgtttcaac
aaatcacagagcagtgaaacagcacctactacacctacaatacctgctacacccagcaca
cccggtgaagctccgcccacaggaagcagcgtgtcactcaatagcccgttcccttaccca
ctgctcagtgcgggcatccctcccacacctggccgggatctgaactttaccccggttttc
ccagactcccctgcctcccttccgcttcaaagaaagtcctcatctgaaaagccactgttc
aaagagcctggcagtgccacttcctgttcttcttccccgcttcctgttgttccagtttcc
tgtttagatgctgctactgtgccaataaatcagcacgttccactcatagaacttcctgtg
cccgacgattctgcttccgcaaagaagaaactgggccgacccagaaagcccgccgttgtt
gaacctgaggatgcccaagaacctcctgaggcaatgatgttgcttccttcagacctcacg
ttgaaggacacgttacccgaatgtgaagcaataccgggagtgcctcgagggtcagaaggc
tccgcagcattggctcagaaggagagggaggaaaaagctgaagtgaaacatgaggaaata
aagaaggacataaaggaagaagtgcaggacgtggaacagacagttctttttgaagagcca
ctacagaaaacacggggtcagaggcggagctgggagacgctcctcctctccatgcacctg
cccgtgaggtcgccaccccggcgcagcttcctgccgcggtccgagtttgaagagatgacc
atcctgtatgacatctggaacgaaggcattgacgaagaggacgtacgctatctcaaaatc
acttacgaaaaaatgttgcagcaggataacagccatgactggctcaacgacacactctgg
gttcctcaccctcctaccagcagtggcagtctgcctggggtcaagaaaaagcggcgggag
gacggtatgcgtgatcacgtgactggctgcgcgcgaagcgagggctactacaaaatcgac
aaaaaggacaaaatgaaatacctgaacagcactaggttacagtcagacgagcctgataaa
gacatgcagggccggatgatcccagctcagccccacgcctcgacccgagcaggctcagag
agacgctcggaacagcgccgcctgctgtcctcgttcagctgtgacagtgacctgctcaaa
ttcaaccagctcaagttccgtaagaagaagatccgattctgtaagagtcacatccatgac
tggggtctgtttgccatggaacccatcgctgctgacgagatggttattgagtacgttgga
cagaacatcagacaggtgatcgcggacatgagggagaagcgttatgaggaggaaggcatc
ggcagcagctacatgttccgtgttgatcacgacaccatcatcgatgctacaaagtgtgga
aacttcgctcgcttcatcaaccatagctgcaatccgaactgctacgccaaggtgattacg
gtggagtctcagaagaagattgtaatctactcgcgccagccgatcaacgtcaacgaggag
ataacctatgactacaagttccccatcgaggacgagaagatcccttgtctctgcggagcc
gagaactgcagggggacgcttaactaa
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integrated database retrieval system