KEGG   Ictalurus punctatus (channel catfish): 108277385
Entry
108277385         CDS       T04658                                 
Name
(RefSeq) DNA-directed DNA/RNA polymerase mu
  KO
K03513  DNA polymerase mu [EC:2.7.7.7]
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    108277385
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ipu03400]
    108277385
Enzymes [BR:ipu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     108277385
DNA repair and recombination proteins [BR:ipu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     108277385
SSDB
Motif
Pfam: DNA_pol_B_thumb DNA_pol_lambd_f HHH_8 DNA_pol_B_palm BRCT NTP_transf_2 Jnk-SapK_ap_N
Other DBs
NCBI-GeneID: 108277385
NCBI-ProteinID: XP_017345557
Ensembl: ENSIPUG00000016367
UniProt: W5UBD8
LinkDB
Position
16:5622170..5628830
AA seq 508 aa
MVPLKRRKVTTEQTASHDSEVCKFPDISIFIVERKMGASRKSFLTRLGRSKGFLIEESYS
SSTTHVVSENNTGDEVDIWIKKQEMEGKVSANSVNLLDISWLTESMASGNPVPIQDWHRL
KTSPKPSEVTPAVVMKSYACQRRTPLKHHNSFLTEALETLAENAEFSENEGRSVAFRRSA
SVLKALPYVVRAMNELKDLPCLGEHSLRVIKEILEDGTSSEVESTRQSEQFQAMKALTGV
FGVGARTADRWFREGLRSPEDLIHTGQKLNHAQQAGVQYYNDLNTPVTKKEAMVISDIVE
KAVKAVLPGAIITLTGGFRRGKEVGHDVDFLITHPEEGAEEKLMPKIVNWLEDQGLLLYQ
KTTRNSYLESKDGPARPPSNMDRFERCFSIFKLEQSQVNSDTRLEASSYNSGTTDGMEER
HSGSSWRAVRVDLVVSPYSQFAFATLGWTGSKLFERELRRWAGQEKGMSLSSHALYDSKQ
QRYLRANSEEDIFAHLGLEYIPPSERNA
NT seq 1527 nt   +upstreamnt  +downstreamnt
atggttcccctaaaacgcaggaaagtgactacagagcaaactgcaagtcatgacagtgaa
gtgtgtaaatttcctgatatttctatattcatcgtggaaaggaagatgggtgcgtccaga
aaatcattcctgacacgtcttggaaggagtaaaggatttctgattgaagagtcttacagc
tcctccaccacacacgtggtgtcagaaaacaacactggggatgaggttgacatttggatt
aagaaacaggaaatggaaggaaaagtctcagccaactccgtcaacctgttggacatcagt
tggttgaccgagagcatggcaagcggaaatcccgtccccattcaagactggcacaggtta
aagaccagcccgaagccctctgaggtcactcctgcagttgtaatgaagagttatgcctgt
cagaggagaactccactgaagcaccacaactcattccttacagaagctctggagacctta
gccgagaatgcagagttcagtgagaatgaaggcaggagcgtagccttccgaaggtcggcg
tctgtcttgaaggcacttccttatgttgtgcgtgcgatgaacgagttgaaagacttgccc
tgcttgggtgagcattcactgagagttataaaggagatattagaagatggcacatcaagt
gaagtggagtcaacaagacagtctgagcagtttcaagccatgaaggcactgactggtgtt
tttggtgtgggagcaaggactgcagatcggtggtttagggaaggcctacgcagcccagag
gacctcatacacacaggacaaaagctaaaccatgcgcaacaagcaggagtgcagtattat
aacgatctgaacacacctgtcactaaaaaggaggctatggtcatcagcgacattgtagag
aaggcagtgaaagctgtgctgcctggggcaattattacactcacaggaggattccgaagg
ggtaaggaggtgggtcatgatgtggacttcctcatcacacacccagaggaaggggcagag
gaaaaattgatgcccaaaattgtgaattggttggaggatcagggtttgctgttgtaccag
aaaacaactaggaattcttacctagaaagtaaagatggacctgctcgtcctcccagtaac
atggaccgatttgagagatgcttctctatattcaagcttgaacaatctcaagtgaacagt
gatacacgtctggaagcttcttcatataactccggcacgacagacggaatggaggagcgt
cactcagggtcttcatggagagctgttcgagtcgatcttgtagtcagtccttacagtcag
tttgcttttgctacacttggctggacaggatccaagctctttgagagggaactgaggcgc
tgggcaggtcaggagaaggggatgtctttaagtagtcatgcactctacgacagcaaacaa
cagcgttatcttcgcgcaaactcagaagaggacattttcgcccatttgggcctggagtac
attccaccttcggagaggaacgcatga

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