KEGG   Ictalurus punctatus (channel catfish): 108278798
Entry
108278798         CDS       T04658                                 

Gene name
nr3c1
Definition
(RefSeq) nuclear receptor subfamily 3 group C member 1
  KO
K05771  glucocorticoid receptor
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04080  Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    108278798 (nr3c1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ipu03000]
    108278798 (nr3c1)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:ipu03310]
    108278798 (nr3c1)
Transcription factors [BR:ipu03000]
 Eukaryotic type
  Zinc finger
   Cys4 estrogen receptor-like
    108278798 (nr3c1)
Nuclear receptors [BR:ipu03310]
 3. Estrogen like
  3C. 3-Ketosteroid receptor
   108278798 (nr3c1)
SSDB
Motif
Pfam: GCR Hormone_recep zf-C4
Other DBs
NCBI-GeneID: 108278798
NCBI-ProteinID: XP_017347885
UniProt: A0A2D0SZW3
LinkDB
Position
18
AA seq 708 aa
MDCWLNNPAKNISLGDQPMRDLLQSTGSTVPTSSSSSDVSNGRSSVNAHRELPMGHTAQE
PDTKAFKMQQQLKEGFNLKDNLALLDESIADLNRTSSSDKLCFRTPEAFTFKMEEFSTLN
KSDYDFGSYDQTEKDESGNDRLLEENTLDILQSLELPGSLSDLNEFCVANDDAFFPSLAV
EDTPLVESSMLKDTKPVLPGKNINGNDKAHPQQTLEHNLNVPVIKTEKDADFIQLCTPGV
IKHESERRGYCQMTTMAGHHGASVNLSMDSQSYHYGANTSLPDQKPVLGLYAPLPTGSDG
WIQGNGFGDASTYTYNRSVLSPDASTLNSPGSARPKGPNSKICLVCSDEASGCHYGVLTC
GSCKVFFKRAVEGWRARQNTHGQHNYLCAGRNDCIIDKIRRKNCPACRFRKCLQAGMNLE
ARKNKKLIRLKVQQATASPPPYMATERQSSLVLKSMPQLVPTMLSLLKAIEPEIVYAGYD
SSIPDTSTRLMTTLNRLGGRQVISAVKWAKALPGFRNLHLDDQMTLLQCSWLFLMSFSLG
WRSYQQCNGGMLCFAPDLVINEERMKLPYMSEQCEQMLKITNELVRLQVSYDEYLCMKVL
LLLSTVPKDGLKSQAVFDEIRLSYIKELGKAIVKRDENSSQNWQRFYQLTKLLDSMQEMV
EGLLNFCFYMFVNKSLSVEFPEMLAEIITNQLPKFKDRSIKPLLFHQK
NT seq 2127 nt   +upstreamnt  +downstreamnt
atggattgttggctgaataatccagccaagaatatatctttaggggatcaacccatgaga
gacctgctgcaaagcacagggagcaccgtacccaccagctcctcttccagtgacgtctcg
aatggacggagcagcgttaacgctcacagggagctaccgatgggacacaccgctcaagag
ccagacactaaagccttcaagatgcagcagcagctgaaggaaggttttaacctgaaggat
aacctggctcttttggacgagagcatcgccgatttaaaccgcacctcaagttccgacaag
ttgtgctttcgaacccctgaagcattcacattcaaaatggaggagttttccactttgaat
aaatctgactatgactttggctcctatgaccagacggaaaaagacgagtctgggaatgac
agactgctagaagagaacaccttggatatcttacagagtctggagctacctggctctctt
tcagacctcaacgagttctgtgtggcaaatgacgatgcgtttttcccttccctggcagtg
gaggacacaccgctcgtcgagagcagcatgctgaaagataccaaacctgtcctgcctgga
aaaaacattaacggcaatgataaagcacatccacagcagactctggaacataacctcaat
gttcctgtcataaagacggagaaagatgcagattttattcagttgtgtacacctggtgtg
atcaagcatgaaagtgagaggagaggctactgtcagatgacgacgatggctgggcatcat
ggagcgtccgtcaatctgagcatggacagccagtcataccactacggtgccaatacttct
ttaccagaccagaagcctgtattaggcttgtacgcccctttgccaactggcagtgatggc
tggattcagggaaatggatttggagatgcttctacctacacatacaacaggtctgttctg
agtcctgacgccagcactttaaactcacccggttccgctcgacccaaaggcccgaacagc
aagatctgcctggtgtgttcggacgaggcgtcagggtgccactacggcgttctgacctgc
ggtagttgcaaagttttcttcaaaagagctgtagaaggatggagagcacgacaaaacaca
catggccaacacaactatctttgcgctgggagaaacgactgcatcatcgacaagatccgc
aggaagaactgtccggcctgccgctttcgcaaatgcctccaagcaggcatgaacctagaa
gcacgcaaaaacaaaaaactgatccgactgaaagtgcagcaggccacggcctcgcccccg
ccctacatggccactgagcgtcagtcctctctggtgctcaagtccatgcctcagctcgta
cccaccatgctgtcactgctgaaggccatcgagcctgaaattgtgtacgccggctacgac
agcagcatccccgacacctccacacgcctcatgaccaccctgaaccgactcgggggacgc
caggtcatctccgccgtcaagtgggccaaagccctgccaggtttccggaatctgcacctg
gatgaccagatgaccctgctgcagtgctcctggctcttcctcatgtccttcagcctcggt
tggagatcttaccagcagtgcaacggaggcatgctgtgcttcgcccctgaccttgtcatc
aatgaggaaaggatgaagctgccctacatgagtgaacagtgtgagcagatgctgaagatc
acgaacgagctggtgcgtctccaggtctcctacgacgagtatctgtgtatgaaagtgctg
ctgttgctcagtacagtaccaaaggatgggctgaagagccaggctgtgtttgatgaaatc
cgcttgtcctacattaaagaactgggcaaagccatcgtcaaacgggacgagaactccagc
cagaactggcagaggttctatcagctcactaagcttttggactccatgcaggagatggtg
gagggacttcttaacttctgcttctacatgtttgtgaacaagtccctgagtgtagagttc
cctgagatgctggctgaaatcatcaccaaccagcttccgaaattcaaagaccggagcatc
aagccacttctctttcatcaaaaatga

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