Ictalurus punctatus (channel catfish): 108279193
Help
Entry
108279193 CDS
T04658
Symbol
nkx6.1
Name
(RefSeq) homeobox protein Nkx-6.1
KO
K08030
homeobox protein Nkx-6.1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108279193 (nkx6.1)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
108279193 (nkx6.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
PKK
ABC_trans_N
Motif
Other DBs
NCBI-GeneID:
108279193
NCBI-ProteinID:
XP_017348728
UniProt:
A0A2D0T1C7
LinkDB
All DBs
Position
18:19829240..19834951
Genome browser
AA seq
318 aa
AA seq
DB search
MLAVGQMDGPRQGAFLLNTSPLSALHSMTEMKTPLYPAYPLPSTGPASSTSPTSTSPNPG
GVPVSSPGIKTSTAGLSTLASQQCLASATPHGINDILSRPSVVASGATSAPAGLLSGLPR
FSSLSPPPPPGLYFSPSAAAVAVARYPKPLAELPGRTPIFWPGVVQSPHWRDARFACSPH
QNSVLLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF
QNRRTKWRKRHAAEMASAKKKQDSETERLKGASENEDDDDDYNKPLDPNSDDEKITQLLK
KHKPNPGLIMHGGDTDSS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgttagctgtggggcaaatggacggacctcgtcagggagccttcctcctcaacacctcg
cctttatccgctctgcacagcatgaccgaaatgaagacgcctctgtacccggcttacccg
ttaccgtctaccggcccggcgtcgtctacctccccgacctcgacctctcccaacccgggc
ggggtcccggtgtcttccccggggatcaaaacgtcaacggctggactctcaactctcgca
tcccagcagtgcttggcctcggccaccccacatgggataaacgacatcctcagtcggccg
tcggtggtcgcctctggagcaacttccgctccagccggtctgctgtctggtctgccccgc
ttcagcagcctgagtccacctcctcctccagggctttatttcagcccgagcgcagctgcc
gtagccgtggcccgctaccccaaaccgctggccgagctgcccggcaggacccctatattc
tggccgggagtggtgcaaagcccgcactggagagatgccagatttgcgtgttcgcctcat
cagaactcagtgctgttggataaggacgggaagaggaaacacacaagacctacgttttcc
ggtcagcaaattttcgctctggaaaagacttttgaacagaccaagtatttagcaggaccg
gagagagcgcgtctggcctactccctgggcatgacagagagccaagtgaaggtgtggttt
caaaaccggagaacgaagtggcggaagcggcacgcggctgagatggcttcggccaagaag
aaacaagactcggagacagagcggctgaaaggcgcgtcggaaaacgaagacgacgacgac
gattacaacaagcctttagatccaaactcggacgacgagaaaatcacgcagctgctgaag
aaacacaaaccgaaccccgggctcataatgcacggaggggacaccgacagctcgtaa
DBGET
integrated database retrieval system
