Ictalurus punctatus (channel catfish): 108280929
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Entry
108280929 CDS
T04658
Symbol
sall3a
Name
(RefSeq) sal-like protein 3
KO
K19871
sal-like protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108280929 (sall3a)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
108280929 (sall3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_11
TDBD
IZUMO
UBZ_FAAP20
zf-H2C2_5
NinF
DUF2225
Motif
Other DBs
NCBI-GeneID:
108280929
NCBI-ProteinID:
XP_053529677
Ensembl:
ENSIPUG00000003378
UniProt:
A0A9F7R6K6
LinkDB
All DBs
Position
20:2952088..2973090
Genome browser
AA seq
1336 aa
AA seq
DB search
MSRRKQAKPQHLKSDEETSALGLGSENVSGEILDDADSGNESRSGSEETHVCEKCCAEFF
KWSDFCEHLKSCTKNPLVLIISENEVTPDLTREYPTEPSPVPSCSSEPADSEEAGEGRHT
PAEVDDGAEMTLEQVASLDKDEEPMDLEMSPEKTLDPEDPDISPEPDVSLPQLDTAQPSG
TGYSMPSTNVTLETLHGTRVAVAQFAQSFRGAIASGMSTMAIPMILDQLMALQQQQIHQL
QLIEQIRSQVALMNRQNPAHAALNHHTHHNTNGGSQPSSTTGLPTIPSQLQLHGFITPPV
HQLPIRVPPTLNVQGPTSLSSALEGCHSHVSKTGSQLSSSIMNSNTSTNSSYPPSSCSVI
PSLLPLQSSITTCSSSSSSSSSSSSGAGTGISSSVSLPRNTSSPPTLTHGSLLSSPSNLP
LMPPSSSSSVIFPNPLASIAATANALDPLSALMKHRKGKPPNVSVFDNKPSSEDPFFKHK
CRFCAKVFGSDSALQIHLRSHTGERPFKCNICGNRFSTKGNLKVHFQRHKEKYPHIPMNP
YPVPEYLDNVPTSSGIPYGMSLPPEKPVTTWLDSKPVLSTAPTSVGLQLPPTLPSMIGGY
GDSPSLTPIGRSPPRPSPPSSECASLSPNVLSTEVSTTLTSASPQPTMGSDVPPVLKPEG
IHLPSNCTTRPGEISMPSTTVSQIVLSSTTTTTTTTTTQITDPVTPPSSGSHSALPMISD
QFKAKFPFGGLLDSMQTSETSKLQQLVENIDKKMTDPNQCVICHRVLSCQSALKMHYRIH
TGERPFKCKICGRAFTTKGNLKTHFGVHRSKPPLRVQHSCPICQKKFTNAVVLQQHIRMH
MGGQIPNTPLPEGFQDMDTDFNFDDKSVDNMSNYDDDLIDEMEQAIDDEADVKDGDVDPL
KPAHSYGEMSPSHSPPTPVISSIAALENQMKMIDSTANMNRAFSLKPSENGSGIGGESGD
VFNNDSSSAMGDLETHSVGSPALSESSGSMQALSPAHSQPESHRSRSPSLVNNNSSNAGE
DIQESGAATATVKSEKSDTPSPGSVPAEHIGVLDLTAAQPVRPYVKEENQFSMLFLGRDR
GLTASSLMASAPGLVKLEMNGHSKPLSLSEGSHLHMGLQVPAAAPQTTMSPSLNPMLAPP
PPRRTPKQHNCQSCGKNFSSASALQIHERTHTGEKPFACSICGRAFTTKGNLKVHMGTHM
WNNAPARRGRRLSVENPMALLGGDAMKFSEMFQKDLAVRAMNVDPGFWNQYAAAITNGLA
MKNNEISVIQNGGIPPLPVSLGGGSIPSLASMSGGMERARTGSSPPMTGLEKTSLEVGTG
RPFSRFLEDNKEIGIN
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgacggaaacaggccaagccgcagcatctcaaatcggacgaggagacttcagcg
ctcgggctgggatcggagaacgtctcaggtgagatcctggacgatgccgacagcggtaac
gagagccgcagtggtagtgaggagacccatgtgtgtgagaaatgctgcgctgagtttttc
aagtggtctgacttctgcgaacatctgaagagctgcaccaagaacccacttgtgcttatt
attagtgagaatgaggtaacaccggacttgacacgggagtacccaacggagccctcaccc
gtgcccagctgttcgagtgagcccgcagacagcgaggaggcaggcgagggccggcacacc
ccagctgaagtggacgatggtgcggagatgactttggagcaagtagccagccttgataaa
gatgaagagcccatggacttggaaatgtctcctgagaaaacactggaccctgaagatcca
gatatatcaccagagcctgatgtcagcctacctcagcttgacacagcccagccctctggg
acaggttacagtatgcccagcacaaatgtcactttggaaacactgcatggaacccgagtg
gctgtggcgcagtttgcccaaagcttccgtggggcaatagctagtggcatgtccaccatg
gccatcccaatgatcctggaccaactgatggctttgcagcagcagcaaattcaccagctt
cagctgatagaacagatccgtagccaagtggccctaatgaacaggcagaaccctgcacat
gcggctcttaaccatcatacacaccacaatacaaatggtggctcacagccatcatctacc
actggccttcccacaattcccagtcagctccagctacatggcttcattacaccacctgtc
caccagctccctataagggtgccacccactttaaatgtccaaggcccaacctcactgtct
tctgccttggaagggtgtcactcccatgtctcaaagacaggcagccagctgtccagttct
ataatgaacagcaacacctcaacaaattcctcatatccaccatcgagctgtagcgtaatt
ccttccttgctgccacttcagagttcaatcactacttgcagcagcagcagcagcagcagc
agcagcagcagcagtggagctggaactggcatcagcagtagtgtttccctccctagaaac
acttcaagtcctccaacactgacccatggaagcctgctgagctccccttctaaccttccc
ctgatgcctccaagttcctcaagtagtgtcatcttccccaacccgctggccagtattgca
gccacagccaatgcacttgatcctctttctgccctgatgaagcaccgcaaaggaaaacct
cctaatgtctctgtatttgacaacaagcctagctcagaagaccccttcttcaaacataaa
tgtaggttttgtgctaaggtgtttggaagtgacagtgcccttcagatacaccttcgttca
cataccggtgaaaggccgttcaagtgcaacatttgtggtaatcgcttctctacaaaaggg
aacttgaaggtccacttccagaggcacaaagaaaagtacccacacattccaatgaacccc
tatccagtgcctgagtatctggacaatgtgccaaccagctcaggcattccttatggcatg
tcgcttcctccagagaagcctgttaccacatggctggacagcaagcctgttttgtccaca
gctccaacctcagtggggctgcagcttcccccaaccctacccagtatgatcggggggtat
ggagattcgcctagtcttactcccataggcaggtcacctccaagaccatcaccaccatca
agtgagtgtgcatctctgtcacccaatgttctcagtactgaagtaagcacaaccctcact
tcggcatctccacagcccaccatggggagtgatgtacccccagttttgaagccagagggg
attcatttgccatccaactgcaccaccagacctggggagatcagcatgccctcgactacc
gtgagccagattgtgctgtcatccacaaccactaccacaaccactaccaccacccagatc
acagacccagtgacccctccatcctctggctctcattccgcccttccgatgatctcagat
cagttcaaggccaagtttccctttggtggcctcctggactctatgcaaacatcagaaacc
tcaaagctgcagcagctggtagaaaacattgacaaaaagatgaccgaccccaaccaatgt
gtcatctgccatcgtgtgctcagttgtcagagtgctctcaagatgcactaccgtatccac
actggggaaaggccttttaaatgcaaaatatgtggccgtgctttcactactaagggcaac
ttgaaaacgcactttggggttcacaggtctaagccacctctacgagtgcagcactcatgt
cctatatgtcagaagaagtttactaatgcggtagtgttgcaacagcatatccgtatgcac
atgggaggtcagattccaaacactcctcttcccgagggctttcaagacatggacacagat
tttaactttgatgataagagtgtagacaacatgagcaattatgatgatgacctgattgat
gagatggaacaggccatagatgatgaggcagatgtcaaagatggagatgtggacccatta
aaaccagcacattcatatggagagatgtctccaagccactctcccccaactccagtcatc
tccagcattgccgctttggaaaaccaaatgaagatgattgactcaacagcaaatatgaat
cgcgcctttagcctgaagccgtctgagaatggaagtgggatcggtggagaaagtggggat
gtgttcaacaacgactcatcctctgccatgggagacttagagacccacagtgtggggagt
ccagccttgtctgagtcatcaggctctatgcaggctctttcgcctgctcacagtcagcct
gagagccatcgttccagatctccaagtctggtcaataacaacagcagcaatgcaggcgag
gatatccaggagtctggtgcagctacagcgactgtgaagtcggaaaagtcagacacacca
tctccaggttctgtaccagctgagcacattggtgtgctagacctcacagctgctcagcct
gtcaggccttatgttaaagaggagaaccagttcagcatgttgttcttaggaagagatcga
ggtctaactgcttcaagcttgatggcctcagcaccaggcctagtcaaactcgagatgaat
ggccacagcaaaccgctgtctttgagtgagggctcccacttgcacatgggccttcaggtg
cctgccgcagcacctcagacaacaatgagccccagcctcaacccaatgctggcaccgcct
ccaccacgccggacccccaagcagcataactgccagtcctgtgggaaaaacttctcttca
gctagtgccctgcagatccatgagcgtacacacacaggagaaaaaccctttgcctgctcc
atctgtgggagagccttcaccacgaagggcaatctgaaggttcacatgggaacccatatg
tggaacaatgccccagccagacgtgggcggcgtctctcagtggaaaaccccatggctctc
ctgggtggtgatgcaatgaaattcagcgagatgttccagaaagacctggcagtccgggcg
atgaatgtagacccggggttttggaaccagtacgcggcggccatcaccaatggactggcc
atgaagaacaacgaaatctccgtcattcagaacgggggcattcctccacttcccgttagc
ctcggaggggggagcatcccttctctggccagtatgtcagggggcatggagagggcacgc
acaggcagcagccctccaatgactggcctcgagaagacaagcctggaggtgggaactgga
cgtcccttctctaggttcctggaggacaacaaagagatcgggatcaattga
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integrated database retrieval system