Ichthyobacterium seriolicida: JBKA6_1400
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Entry
JBKA6_1400 CDS
T05228
Name
(GenBank) DNA recombination and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
ise
Ichthyobacterium seriolicida
Pathway
ise03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ise00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JBKA6_1400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ise03400
]
JBKA6_1400
DNA repair and recombination proteins [BR:
ise03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JBKA6_1400
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_21
AAA_23
AAA_29
RsgA_GTPase
SbcC_Walker_B
Motif
Other DBs
NCBI-ProteinID:
BAV95413
UniProt:
A0A1J1E361
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All DBs
Position
1828934..1830043
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AA seq
369 aa
AA seq
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MAGQNKIFKCYMFLSQISISNFKNLANKNFKLSPNINCFVGNNGVGKTNILDAIYYLSCC
KSYFNNIDVQNILHGEDFFSIEGKYKNSEDTDIILCGFQRGNKKIVKRNGKKYTKLYQHI
GKIPIVIISATDRDIIEKSEMRRKFIDSIICQLDKNYIDKLVRYKKILIQRNYLLKHFAS
NNVFNRDNLEIYNDQLSDLSFEIHIRRKSFLEDFLPLFKEIYENISGCDEKVEIEYQSQL
NHKTADILFSESIGRDMETQSTSTGIHKDDWLFSIREFPVKKNASQGQQKSFLIALKIAE
LYFLEKTRNIKPILLIDDIFDKLDQVRIERIINLIKRDNFGQIFISDTHYQRTEEIVKKI
DKEYYMFEM
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
ttggcgggtcaaaacaaaatatttaagtgttacatgtttctatcacagataagcatctca
aacttcaaaaatttagctaataaaaatttcaaattatctccgaatataaactgctttgta
ggcaataatggagtggggaaaactaatattttagatgctatttattatctctcgtgttgt
aagagttatttcaacaatatcgatgttcaaaatatattacacggagaagattttttttct
atagaaggaaaatataaaaactcagaagatacagatattatactttgtggttttcaacgt
ggcaataagaaaatagttaaaagaaatgggaaaaaatacacaaaattataccaacacata
ggcaaaatccctatagtcataatatctgccacagatagagatattatagaaaaaagcgag
atgaggagaaaattcatagatagtataatctgtcaattagataaaaattatatagataaa
ctcgtcagatacaaaaagatacttattcaaagaaattatttgctcaaacattttgccagt
aataatgtttttaatagggataatttagagatatacaacgatcaattatccgatctatct
tttgaaatacacattagaagaaagtcttttttagaggattttcttcctttatttaaagag
atatacgaaaatatttctggatgtgacgagaaagtggaaatagaatatcaaagtcaactg
aatcataaaacagctgatattttattttcagagtctattggcagggacatggagacacaa
agcacctcgactggaatacataaagacgattggctctttagcataagagaattcccagtt
aaaaaaaatgcatctcagggtcagcaaaaatcttttctcatagctttaaaaatcgctgag
ttatacttcctcgaaaaaacacgtaatatcaaacctatcttattgatagatgatatcttt
gacaaattagatcaagttagaatagagagaattataaatctcataaaacgagataatttt
ggacagatatttatttcagatactcattaccagagaacagaggaaatagtaaaaaaaata
gataaggaatattatatgtttgagatgtaa
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