Janthinobacterium sp. B9-8: VN23_11870
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Entry
VN23_11870 CDS
T04271
Name
(GenBank) exonuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
jab
Janthinobacterium sp. B9-8
Brite
KEGG Orthology (KO) [BR:
jab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jab03400
]
VN23_11870
DNA repair and recombination proteins [BR:
jab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VN23_11870
Archaeal homologous recombinant proteins
VN23_11870
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AMC35259
UniProt:
A0A0X8GNJ3
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Position
2665176..2666399
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AA seq
407 aa
AA seq
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MKIIHTSDWHLGQHFMGKTRQAEHQAFLDWLLASAITHNADAILVAGDIFDTGSPPSYAR
ELYNHFIVALSKTGARLIILGGNHDSVATLGESKSLLAELNTSVIPGVAADQATQVLLLR
QKDGSAGAVLCAIPFIRARDVQQSVAGQSSDEKQLSLQEGIFQHYQTLYQRALDTRMELG
LPTLPIIATGHLTTVGASASESVREIYVGALEAFPTSAFPPADYIALGHIHRPQKVGGFE
HIRYCGSPIPLSFDEAKQAKEVLLVSLNHEGLQAVEPLAIPRFQALISLRGNLAELESAI
GALASKESKNESIWLEVLVSSDDYLSDLQSRIEELTKGTQIEVLRIRRERGNAASTWQAD
SKETLAELSPADVFAQRIASEEIKAPLLIELEKRYAQTVTMLQEAKA
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcatccacacctcggactggcatctgggccagcattttatgggcaagacgcgc
caggctgagcatcaggcttttttagactggctgctggctagcgcaatcacccacaatgcc
gatgcaattctggtggcaggggatattttcgatacgggttcgccgcctagttatgcccgc
gagctttacaaccactttattgtggccctcagcaaaaccggcgctaggctgattatttta
ggggggaatcatgactcggttgccactttgggcgaaagcaaatcactgcttgccgagcta
aacaccagcgtgatccccggagtggcagcggatcaagctacgcaggttttgctgctcagg
caaaaagacggcagcgctggagccgttttatgcgcgattccttttatccgcgcgcgcgat
gtgcagcaaagcgtggcggggcaaagcagcgatgaaaagcagctcagcttgcaagagggt
atttttcagcactaccaaacgctatatcagcgtgcattggatacgcgcatggagctagga
ttgccaaccttgcccatcatcgccaccggccatctcaccacggttggcgcaagcgccagt
gaatcggtgcgtgagatttatgttggcgcgctggaagccttccccaccagcgcctttcca
cctgctgactatattgcgctggggcatattcatcgcccgcaaaaagtcggcggctttgag
catatccgctactgcggctcgccgattccactaagctttgatgaagctaaacaggccaaa
gaagtgctgctggtcagcttaaaccatgaaggtttacaagcagttgagccactcgccatc
cctcgctttcaagcgcttatctccttacgcggcaacttggccgagctggaatcagccatc
ggcgccttggcaagtaaggaatcaaaaaacgaatcgatctggctggaagtgctggtcagc
agcgatgattaccttagcgacttacaaagccgcatagaagagctgactaaaggcacgcag
atagaagtgctgcgcatccgcagagagcgcggtaatgctgccagcacttggcaagcggat
agcaaggagaccttggccgagctaagccctgccgatgtatttgcccagcgcatcgccagc
gaagaaatcaaagcgccactcttgatcgagctggaaaaacgctacgcacaaaccgtcacc
atgttgcaggaggccaaggcatga
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