KEGG   Janthinobacterium agaricidamnosum: GJA_1881
Entry
GJA_1881          CDS       T03157                                 
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
jag  Janthinobacterium agaricidamnosum
Pathway
jag03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:jag00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    GJA_1881 (recB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:jag03400]
    GJA_1881 (recB)
Enzymes [BR:jag01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     GJA_1881 (recB)
DNA repair and recombination proteins [BR:jag03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     GJA_1881 (recB)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 DUF6825 PDDEXK_1
Other DBs
NCBI-ProteinID: CDG82517
UniProt: W0V5I9
LinkDB
Position
2068103..2071765
AA seq 1220 aa
MSSQLLQPLSFPLHGSRLIEASAGTGKTWTIAALYVRLVLGHGGAQGFTRPLLPADILVM
TFTRAATRELSNRVRQRLVEAAAYFRGEASRGDDYLDALLESYPDYSERQKAAHRLMLAA
ETMDEAAIFTIDAWCQRMLREHAFDSGSLFDEELVSDEQALFEDAAHDYWRQQVYPLNAV
ALEALLACWNDVGVLKKTIRELARRAASLDTGADEALGALIGRVQAEQQARLAQLKQGWL
ERADRMEQWIARQRELSPKCFNGTKMKPESLLKWFDGLRAWAGQPHLVRPDISDTAWRRL
TPDGIADAYARNFTAEVPDDFDATAALAAALAQIQPLAHALYRHAAGKIAARIEELKRRA
RQFGFADMLLRLQAALQGENGAALRQRIVDQYPLVMVDEFQDTAPGQYRIFDLLYRVAGN
DPALGLFLIGDPKQSIYGFRGADIQSYLAARRATAGRHYQLGTNYRSTEPLVAAVNQLFL
HAEGSEHFAGFTAGAFRYRNERENPLPFEAVRAKGRGDRLVTGDGPLPALSVTLASDENL
KGDGYRDYFAQHCAEHIVALLNDPLAGFDGQNGLVRLQPADIAVLVRDRREAAAIRRALQ
QRKVASVYLSDKDSVIDSEEAADVLRWLHALANPLDGALARAAFATRTIGLPLAALAALS
SNELEWEQRVEQLKGLHLVWQRQGVLAMLRRFIHELKLPSALLRQPGGERRLTNLLHLAE
LLQSASRQLDGEQALIRWLAEQIAGGGDGQGDSGERVLRLESDAELVKVVTVHKSKGLEY
PLVYLPFAVTARKAERRNRSFFEYTDGDGVRQIDMALSDDALEAVEAARIEEDLRLLYVA
LTRARHYLWLGVAALASRKAGDNVLHESALGYLLAGGEKLPAAELLPRWQRLRQVCGDIA
IAVAGQPEKMTPLKRLELRPALGDAALFGGRFERDWTVGSFTSLTRQIGAANAHVPQLAR
DETLLEDDDSTEAMRTDDAPWHRFPRGSVPGNFLHEQLEWMGQEGFAIIHDDTFDSRLAA
RCERAGWGHRQDDTIIWLRAVAETPLPLLGAALCEIASLLPEMEFWFPSERLNTAALDQL
CSAHLLGETPRPALPRRQLHGMLKGYADLVIERDGRYWVLDYKSNFLGTGDGAYHRQALA
NGMAQHRYDIQGAVYLLALHRLLRSRLGDSYDPQQHLGGALFLFLRGIANPHTHGCYWLA
PDTALLDGLDRLLDEPHHED
NT seq 3663 nt   +upstreamnt  +downstreamnt
atgagcagccaattgctgcaaccgttgagttttccgctgcacggctcgcgcctgatcgaa
gcgagcgccggcaccggcaagacctggaccatcgccgcgctgtacgtgcggctggtgctg
ggccatggcggcgcgcagggttttacgcggccgctgctgccggccgacatcctggtgatg
accttcacccgcgccgccacgcgcgaactgtcgaaccgggtgcgccagcggctggtcgag
gcggcggcttatttccgcggcgaggccagtcgcggcgacgattacctcgatgcgctgctg
gaatcctaccctgactacagcgaacggcaaaaggcggcgcaccggctgatgctggccgcc
gaaaccatggacgaggcggcgatcttcaccatcgacgcgtggtgccagcgcatgttgcgc
gagcatgcgttcgacagcggcagcctgttcgacgaagaactggtcagcgacgaacaggcg
ctgttcgaggatgcggcccacgattactggcgccagcaagtctatcccttgaacgcggtc
gcgctggaagcgctgctggcgtgctggaacgatgtcggggtgctcaagaaaaccatccgc
gaactggcccggcgcgccgccagcctggacaccggtgccgatgaggcgctgggcgccttg
atcggccgggtgcaggccgagcagcaggcgcggctggcgcaactgaaacagggctggctg
gaacgggccgaccgcatggaacaatggatcgcccggcagcgcgagctgtcgccgaagtgt
tttaacggcaccaagatgaagccggaatcgttgctcaaatggttcgacggcttgcgggcc
tgggccggccagcctcacctggtcaggccggacatcagcgacaccgcgtggcgccggctg
acgccggacggcatcgccgacgcgtacgccaggaatttcacggccgaggtgccggacgat
ttcgacgcgaccgccgcgctggccgccgcgctggcgcagatccagccgctggcgcatgcg
ctgtaccggcacgcggccggcaagatcgccgcgcgcatcgaggaattaaaacgccgcgcg
cgccagttcgggttcgccgacatgctgctgcgcctgcaagccgcgctgcaaggcgaaaac
ggcgccgcgctgcgccagcgcatcgtcgaccagtatccgctggtcatggtcgatgaattc
caggataccgcgccgggccagtatcggattttcgacttgctgtaccgggtcgccggcaac
gatccggcgctgggcctgttcctgatcggcgacccgaaacagtcgatttacggctttcgc
ggcgccgacatccagagctacctggcggcgcgccgcgccaccgccggccggcattaccag
ctgggcaccaattaccgctcgaccgaaccgctggtggcggcggtcaaccagctgttcctg
cacgccgaaggttccgaacatttcgctggttttaccgccggcgccttccgctaccgcaat
gagcgggaaaatccgctgccgttcgaggccgtccgcgccaagggccgcggcgaccggctg
gtgactggcgacggcccgctgcccgccttgagcgtgacgctggccagcgatgaaaacctg
aagggcgacggctaccgcgattatttcgcgcagcactgcgccgaacatatcgtcgccttg
ctgaacgatccgctggccggttttgacggccagaacggcctggtacggctgcagccggcc
gatatcgcggtgctggtgcgcgaccgccgcgaagcggccgcgatccgccgcgcgctgcag
cagcgcaaggtcgccagcgtgtatttgtcggacaaggattcggtgatcgacagcgaagag
gcggccgacgtgctgcgctggctgcacgcgctggccaatccgctcgatggcgcgctggca
cgggccgcgttcgcgacgcgcaccatcggcttgccgctggccgcactggcggccttgtcg
agcaacgaactggaatgggaacagcgcgtcgaacaattgaagggcttgcacctggtctgg
cagcgccagggcgtgctggcgatgctgcgccgcttcatccatgaactgaaattgccgtcg
gcgctgctgcgacagccgggcggcgaacggcgcctgaccaatttgctgcacctggccgaa
ttgttgcaatcggccagccgccagctcgatggcgaacaggcgctgatacgctggctggcc
gagcagatagctggcggcggcgacggccagggcgacagcggcgaacgggtgctgcgcctt
gaaagcgacgccgaactggtcaaggtggtgacggtgcacaagtccaagggcctggagtat
ccgctggtgtatctgccgttcgcggtcaccgcgcgcaaggccgagcggcgcaaccgcagc
ttcttcgaatataccgacggcgacggcgtgcgccagatcgacatggccctgagcgacgac
gcgttggaagcggtcgaggcggcgcgcatcgaagaagatttgcggctgctgtacgtggcg
ctgacgcgcgcccgccactacctgtggctgggcgtggcggcgctggccagccgcaaggcc
ggcgacaatgtgctgcacgaatcggcgctcggctatttgctggccggcggcgaaaaattg
ccggccgccgaattgctgccgcgctggcagcgcttgcggcaagtgtgcggcgacatcgcc
atcgccgtggccggccagcccgaaaaaatgacgccgttgaagcgtcttgaattgcgtccg
gcgctgggcgatgcggcgttatttggcggacggttcgaacgcgactggacggtcggcagt
tttacctcgctgacgcggcagatcggcgccgccaatgcgcatgtgccgcaactggcgcgc
gatgaaaccctgctggaagacgacgacagcacagaggcgatgcgcaccgacgacgcgccg
tggcaccgttttccgcgcggctcggtgccgggcaacttcctgcatgagcaactggagtgg
atgggccaggaaggcttcgccatcatccacgacgacaccttcgacagccggctggccgcg
cgctgcgagcgggccggctggggccaccgccaggacgataccatcatctggctgcgcgcg
gtggccgaaacgccgctgccgctgctgggcgccgcgctgtgcgagatcgcatcgctgctg
ccggaaatggaattctggttccccagcgagcgcttgaataccgccgcgctggaccagctg
tgcagtgcgcatctgctgggcgaaacgccgcgtccggccttgccgcggcgccagctgcac
ggcatgctgaaagggtatgccgacctggtcatcgaacgcgacggccgctactgggtgctc
gactacaaatcgaatttcctcgggaccggcgatggcgcctaccatcggcaggcgctggcc
aacggcatggcgcagcaccgctacgatatccagggcgcggtctacctgctggcgctgcac
cgcttgctgcgcagccgcctgggcgacagctacgatccgcaacagcacctgggcggcgcg
ctgttcctgtttttgcgcggcatcgccaacccgcatacccacggctgttactggctggcg
ccggacaccgcgctgctcgacggcctggaccgattactcgatgagccccaccatgaagat
tga

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