Janthinobacterium agaricidamnosum: GJA_3897
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Entry
GJA_3897 CDS
T03157
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
jag
Janthinobacterium agaricidamnosum
Brite
KEGG Orthology (KO) [BR:
jag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jag03019
]
GJA_3897 (orn)
03009 Ribosome biogenesis [BR:
jag03009
]
GJA_3897 (orn)
Messenger RNA biogenesis [BR:
jag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GJA_3897 (orn)
Ribosome biogenesis [BR:
jag03009
]
Eukaryotic type
Pre-60S particles
RNases
GJA_3897 (orn)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
pP_pnuc_1
Motif
Other DBs
NCBI-ProteinID:
CDG84508
UniProt:
W0VAY1
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All DBs
Position
complement(4213078..4213593)
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AA seq
171 aa
AA seq
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MDMEMTGLEPDTDRIIEVAVVVTDMHLNVLAEGPVFAIHQSDETLDKMDAWNKGTHGRSG
LIERVKASTVTEAQAEAELIAFLKKYVPAGKSPMCGNTIGQDRRFMVRGMPKLEAFFHYR
NVDVSTLKELCKRWKPEIVSGFKKHQKHTAMADIIESIEELKYYREHFIKL
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
gtggatatggaaatgaccggcctggaaccggataccgaccgcatcatcgaagtggcggtg
gtggtcaccgacatgcacttgaacgtgctggccgaaggcccggtattcgcgatccaccag
tccgacgaaaccctggacaagatggatgcatggaacaagggcacccacggccgttccggc
ttgatcgagcgggtcaaggcgtcgaccgtgaccgaagcgcaagccgaagccgagctgatc
gccttcctgaaaaaatacgtcccggccggcaagtcgccgatgtgcggcaacaccatcggc
caggaccgccgcttcatggtgcgcggcatgccgaaactggaagcgtttttccactatcgc
aatgtggacgtttcgacactgaaagaattgtgcaaacgctggaaaccggaaatcgtcagc
ggcttcaagaaacaccagaagcacaccgcgatggccgacatcatcgaatcgatcgaagaa
ttgaagtattaccgcgagcatttcatcaagctgtaa
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