KEGG   Janthinobacterium agaricidamnosum: GJA_4473Help
Entry
GJA_4473          CDS       T03157                                 

Gene name
ddl
Definition
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
jag  Janthinobacterium agaricidamnosum
Pathway
jag00473  D-Alanine metabolism
jag00550  Peptidoglycan biosynthesis
jag01100  Metabolic pathways
jag01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:jag00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    GJA_4473 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    GJA_4473 (ddl)
 09160 Human Diseases
  09175 Drug resistance: Antimicrobial
   01502 Vancomycin resistance
    GJA_4473 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:jag01011]
    GJA_4473 (ddl)
Enzymes [BR:jag01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     GJA_4473 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:jag01011]
 Precursor biosynthesis
  Amino acid ligase
   GJA_4473 (ddl)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp ATP-grasp_3 CPSase_L_D2 RimK GARS_A ATP-grasp_4 ATPgrasp_ST ATPgrasp_Ter TTL
Motif
Other DBs
NCBI-ProteinID: CDG85080
UniProt: W0VBS7
LinkDB All DBs
Position
complement(4841391..4842341)
Genome map
AA seq 316 aa AA seqDB search
MGKVGVLFGGRSAEREVSLMSGNGVLNALLSHGVDAHAFDPGVRSLAELAAEKFDRVFIA
LHGRFGEDGSLQGALEQLGIPYTGSGVMACSVGMDKIYTKLIWLMHGLPTPKYAVLDDQS
DLNQVAAELGLPLIVKPPHEGSTIGITKVSEASAFQAAYDIAAGLDDSVLAEEFVTGREF
TVAVLGHGAGARALPVVEIVAPQGNYDYQNKYFTDDTQYFCPAVLDQATTDEMQRIALEA
YRSLGCEGWGRVDVLLRSSDNRPFLLEVNTSPGMTGHSLVPMAARAVGISYEDLCLEIVG
TARLKMSGPKQQGQGR
NT seq 951 nt NT seq  +upstreamnt  +downstreamnt
ttgggcaaggtcggcgtgctgttcggcggccgttccgcggagcgcgaagtgtcgctgatg
tccggcaatggcgtactcaatgccctgttaagccacggcgtcgatgcgcacgccttcgat
ccgggcgtgcgcagcctggccgaactggcggcggaaaaattcgaccgcgtgttcatcgcg
ctgcacggccgcttcggcgaagacggcagcctgcagggcgcgctggaacagttgggcatc
ccgtacaccggcagcggcgtgatggcgtgctcggtcggcatggacaagatttacaccaag
ctgatctggctgatgcacggcttgccgacgccgaagtacgcggtgctggacgaccagtcc
gacttgaaccaggtcgcggccgaattgggcttgccgctgatcgtcaagccgccgcacgaa
ggctcgaccatcggcatcaccaaggtcagcgaagcgtcggcgttccaggcggcctacgat
atcgccgcgggtctcgacgattcggtgctggccgaggaattcgtcaccggccgcgagttc
accgtggcggtgctgggccacggcgccggtgcgcgcgccttgccggtggtggaaatcgtc
gcgccgcaaggcaattacgattaccagaacaagtactttaccgacgatacgcagtatttc
tgcccggcggtgctggaccaggcgaccactgacgaaatgcagcgcatcgctctggaagcg
taccgcagcctcggttgcgagggctggggccgggtcgacgtgctgctgcggagcagcgat
aaccggccgtttttgctggaagtgaatacctcgccgggcatgaccggccattcgctggtg
ccgatggcggcgcgcgcggtgggtatcagctatgaagacctgtgcctggaaatcgtcggc
acggcgcgcttgaaaatgtcgggaccgaagcagcaagggcagggacggtaa

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