Janthinobacterium sp. LM6: BZG29_06665
Help
Entry
BZG29_06665 CDS
T04756
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
jal
Janthinobacterium sp. LM6
Brite
KEGG Orthology (KO) [BR:
jal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jal03016
]
BZG29_06665
Enzymes [BR:
jal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BZG29_06665
Transfer RNA biogenesis [BR:
jal03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BZG29_06665
Prokaryotic type
BZG29_06665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
TruB_C
Spo16_C
NMD3_OB
Motif
Other DBs
NCBI-ProteinID:
AQR68071
LinkDB
All DBs
Position
1516150..1517085
Genome browser
AA seq
311 aa
AA seq
DB search
MAGSKRPPGIKRVRDLVDGVLLLDKPVGWSSNDALIKAKRVLNAKKAGHTGTLDPFATGL
LPLCFGEATKFSQDLLEADKTYETLVHLGQTTDTGDTEGEVLETRDVNVTEEQIEAVLAQ
FRGPILQTPPMYSALKRDGKPLYEYARAGITLEREARPVTIHKLEFLGYEAPFLKLSVMC
SKGTYIRVLGEDIGRALGCGGHLNALRRTHVGNLTLDGVVTLDELTAHAAPLSLLAPVDA
LLSSFPAVQLTEELAKRFLHGQRIALGKEDVAVPAEPGRVRVYHDSKLLGTGQLQEYSIL
APERLIATAHQ
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtagtaagcggccgccaggcatcaagcgggtgcgcgacctggtcgacggcgtc
ttgctgctggataagcctgtcggctggtccagcaatgacgccctgatcaaggccaagcgc
gtgctgaacgcgaagaaggcgggccatacgggcacgctggacccgttcgccacgggcttg
ctgccgctgtgctttggcgaggcgacgaagttctcgcaggacttgctggaagccgataaa
acctacgaaaccctggtgcacctggggcagacgacggatacgggcgataccgagggcgaa
gtgctggaaacgcgcgacgtcaacgtcaccgaagagcagatcgaagccgtgctggcgcag
ttccgtgggccgatcctgcagacgccgcccatgtactcggccttgaaaagggacggcaag
cccttatatgagtatgcaagggccggcatcaccctggagcgcgaagcgcgcccggtgacc
atccacaagctcgagttcctcggctacgaagccccgttcctgaaattgtccgtgatgtgc
agcaagggcacgtatatccgcgtgctgggcgaagacatcggccgtgccttgggttgcggc
ggtcatttgaacgccttgcgccgcacgcacgtgggcaacctgaccctcgacggcgtcgtc
accttggacgagctgacggcgcatgccgcgccgttgagcctgctggcgcccgtcgatgcc
ttgctgtcgagtttccctgccgtccagctgacggaagaattggccaagcgtttcctgcac
ggccagcgcatcgcgctgggcaaggaagacgtcgccgtgccagccgagccgggcagggtg
cgcgtgtatcacgacagcaagctgctgggcacgggccagttgcaggaatacagcatcctg
gcgcccgagcggctcattgccacggcgcatcaataa
DBGET
integrated database retrieval system
