Jannaschia sp. CCS1: Jann_1683
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Entry
Jann_1683 CDS
T00330
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
jan
Jannaschia sp. CCS1
Pathway
jan03030
DNA replication
jan03410
Base excision repair
jan03420
Nucleotide excision repair
jan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Jann_1683
03410 Base excision repair
Jann_1683
03420 Nucleotide excision repair
Jann_1683
03440 Homologous recombination
Jann_1683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jan03032
]
Jann_1683
03400 DNA repair and recombination proteins [BR:
jan03400
]
Jann_1683
Enzymes [BR:
jan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Jann_1683
DNA replication proteins [BR:
jan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Jann_1683
DNA repair and recombination proteins [BR:
jan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Jann_1683
NER (nucleotide excision repair)
GGR (global genome repair) factors
Jann_1683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Taq-exonuc
Motif
Other DBs
NCBI-ProteinID:
ABD54600
UniProt:
Q28RR2
LinkDB
All DBs
Position
1665993..1668782
Genome browser
AA seq
929 aa
AA seq
DB search
MAFGKGHHLHLVDGSAFIFRAYHALPPLTRKSDGLPIGAVAGFCNMLHKMIEGNTGPDAP
THAAVIFDKGSHTFRNDLYDQYKANRDAMPEDLRPQIPLTRDATRAFNLACIEMEGFEAD
DIIATYARMAREAGGRCTIISSDKDMMQLVGDGVEMFDAMKNTRIDREGVEAKFGVGPER
VVDVQALAGDSVDNVPGAPGIGIKTAALLINEYGDLDALLDRAEEIKQPKRRQTLIDHAD
QIRLSRQLVLLDENVELEDGLDALDVREPDHDTLLAFLAEMEFRTLTKRIADSAGVEAPV
IEEPAPEAAPDAPEMPPIDHAKYEVVNDVKTLQAWVDRAVVRGEVAFDTETTSLNEMTAE
LVGVSLCIEPGAACYIPLLHRGGGDDLFADTSLAEGQIPFDDAMEILQPMLEDRSVMKVA
QNAKYDVKVLANYGVEVAPIDDTMLLSYALHAGLHNHGMDGLAERYLGHTPLPIKSLIGS
GKSQITFDRVPIADAAPYAAEDADITLRFHKLFKPKLHQVGVTKVYERLERPLVPVLARM
ERSGIKVDKDVLSRMSNAFAQKMAGLEAEIHELAGESFNVGSPAQLGEILFDKMGLQGGK
KGKTGKYSTGADILEDLATEHDLPGRVLDWRQLSKLKSTYTDALQDHINADTGRVHTSYS
IAGANTGRLASTDPNLQNIPIRSEEGRRIREAFVAEPGKVLVALDYSQIELRILAHIAGI
DALKDAFKDGQDIHAATASEMFNVPLEEMTPDVRRQAKAINFGVIYGISGFGLARNLRIP
RAEAQGFIDRYFERFPGIRTYMDDTKKFAKENLYVQTLFGRKIHTPEINAKGPGAGFAGR
AAINAPIQGTAADIIRRAMIRMEDAIEGIPAKMLLQVHDELVFEVDEDATDTLIARAREV
MEGAADPAVHLSVPITVDAGQGETWAEAH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggcattcggcaaagggcatcatctacaccttgttgatggatcggcattcatcttccgc
gcctatcatgcgctgccaccgctgacccgcaagtccgatggcctgcccatcggtgcggtg
gcgggtttctgcaacatgctccacaagatgatcgaggggaataccggccccgatgcgccg
acccacgccgccgtgatcttcgacaagggcagccacacgttccgcaacgacctctatgat
caatacaaagccaaccgtgatgcgatgcccgaggatttgcgcccgcagatcccgctgacc
cgcgacgcgacccgcgcgttcaaccttgcctgcatcgagatggaggggtttgaggccgac
gatatcattgccacctatgcccggatggcgcgggaggccggggggcggtgtacgatcatc
agctcggacaaggacatgatgcagttggtcggcgacggggtggagatgttcgacgcgatg
aagaacacccgcatcgaccgcgagggggtggaggcgaagttcggcgttggccccgaacgg
gtcgtggatgtgcaggcgttggccggtgacagcgtggataacgtgcccggcgcgccgggg
atcgggatcaagacggcggcgcttttgatcaacgaatacggggatctggacgcgctgctg
gaccgcgcggaagagatcaagcaacccaagcggcgtcagaccctgatcgaccacgcggac
cagatccgcctgtcgcggcaattggtcctgctggatgagaatgtggaactggaggacggc
ctcgacgcgctggatgtgcgtgagccggatcacgacacactgctggcgtttctggcggaa
atggagttccgcaccctgaccaaacgcatcgcggacagcgcgggtgttgaggcgccggtg
attgaggagcccgcgccggaagcagcccccgatgcgccggagatgccgccgattgaccac
gccaaatacgaggtcgttaacgacgttaagaccttgcaggcttgggtcgaccgtgccgtg
gtgcgcggtgaggtggcgtttgatacggagacgacgtccctcaacgagatgaccgcggag
cttgttggcgtgtcgctttgcatcgagcccggggcggcgtgctacattccgctgctccac
cggggcggcggcgatgacctcttcgctgacacctcgctagccgaggggcagatccccttt
gacgacgccatggagatcctgcagccgatgctggaagatcgcagcgtcatgaaagtcgcc
caaaacgccaagtacgatgtgaaggtcctggcgaattatggcgtggaggttgcgcccatc
gacgacacgatgctgctgtcctacgcgctgcatgcgggtctgcacaatcacggcatggat
gggttggcggagcgctatctgggccacacgccgctaccaatcaagtccctgatcggaagc
ggaaaatcacagatcacgtttgaccgggtgccgattgccgatgccgcgccctacgccgca
gaagacgccgatatcacgctgcgctttcacaagctgttcaagccgaaactgcatcaggtc
ggcgtcaccaaggtttatgaacggctggagcggcctctggtgccggtcctcgcgcggatg
gagcggtccggcatcaaggtcgacaaggacgtgctcagccgtatgtccaacgcattcgcg
cagaagatggcggggctggaggcggaaatccatgagctggcgggcgaaagtttcaacgtc
ggctcgcctgcgcaattgggcgaaattctgtttgataagatgggcttgcaaggggggaag
aagggcaagacgggcaaatattccaccggcgcggatattctggaagatctggcgactgag
catgacttgccgggccgcgtgctggactggcggcagctgtcgaaactgaaatccacctac
acggacgcgttgcaggaccacatcaacgccgacacgggccgcgtgcacacgtcctattcc
attgcgggcgcgaatacggggcggttggcctccaccgatcccaacctgcagaacatcccg
atccggtcggaggaaggccgccgcatccgggaggcgtttgtagccgagcccggtaaagtt
ctggtggcgcttgattattcccagatcgagctgcgcatcctcgcccatatcgcgggcatc
gacgcgctgaaagacgcgttcaaggacgggcaggacatccacgccgccaccgcgtccgag
atgttcaacgtgccgctggaagagatgacgccggacgtccgccgtcaggccaaggcgatc
aacttcggggtgatctacggcatctcgggcttcgggctggcgcgcaacctgcgcattccg
cgggccgaggcgcagggcttcatcgaccgctattttgaacggtttcccggcatccgcacc
tacatggacgacaccaagaaattcgccaaagaaaatctttacgtccaaaccctgttcggg
cgcaaaatccacacacccgagatcaatgcgaaaggccccggcgcaggctttgccgggcgc
gccgcgatcaacgcaccgatccaggggacagccgccgacatcatccgccgcgcgatgatc
cggatggaggatgcgattgagggcattccggccaagatgttgcttcaggttcacgatgaa
ctggtgttcgaggtggatgaagacgccacggacacgctgatcgcccgcgcccgcgaggtc
atggaaggcgcggcggacccggcggttcatctgtcggtgcccatcaccgtcgatgcaggg
cagggggaaacctgggcggaggcccattga
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