Jannaschia sp. CCS1: Jann_3294
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Entry
Jann_3294 CDS
T00330
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
jan
Jannaschia sp. CCS1
Pathway
jan02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Jann_3294
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
jan02000
]
Jann_3294
Transporters [BR:
jan02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Jann_3294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
CBM_5_12_2
Motif
Other DBs
NCBI-ProteinID:
ABD56211
UniProt:
Q28M51
LinkDB
All DBs
Position
3348360..3350081
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AA seq
573 aa
AA seq
DB search
MKRTSILLGCAAAMACAPMAALADGHLSRGGSGHLNIIYWQAPSTLNPYLSGGTKEVESA
SLILESLGRFDDTGELVPWLAAEIPTVENGGISEDLTQITWTLQEGILWSDGTPLTAADA
VFTWEYCTDSESGCAQASYFDGVEAVEAVDDTTIQITFNAPTPFPYTALVGSESPIIQAA
QFADCVGARAPECTEANFGPIGTGPFVVTDFRPNDVIELVANDNYRVPEQPHFASVTFKG
GGDATAAARSVLETGEFDYAWNLQIDPTILAQMEAQGNGTVVTAFGTSVERLHLNQTNPD
AALGDMRSTVEGGPHPFLTDPIVGQAMSMAIDRALIVEIGYGAGGQPTCNVLPAPEAYAS
TANDGCLVQDIAGANALLDEAGHVDTDGDGIREYNGVPMTVLYQTSTNAVRQDTQALVKQ
WWEEIGIGSELRNIDASVFFGGDPASPDTFQKFYADVEMYTNNFSGVDPQAYMANWLCSD
IPGPDTQWQGANIQRFCSEDYDALVAEMAGTADLAERGRLAMAMNDMIMQSYSIIPLVHR
GGVSAHANTLGGVRMSDWDTELWNIAEWHRIPE
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtacatccattcttctggggtgcgccgccgcgatggcctgcgcccccatggcc
gcgctggccgacgggcatctgtcccgcggcggttccggccacctcaacattatctattgg
caagcgccctcaacgctgaacccgtatctgtcgggcggcacgaaagaggtcgaatccgcc
tcgctgatcctggaaagcctgggtcgctttgacgacaccggcgagctggtcccatggctg
gccgccgagattccgaccgttgagaacggcggcatctccgaggatctgacgcagatcacc
tggacgctgcaggaaggcatcctgtggtccgatggcacgcccctgacggcggcggacgcc
gtgttcacgtgggagtattgtaccgattccgagagtggctgcgcccaggcgtcctacttt
gacggcgtcgaagcggttgaggctgtggacgacacgacgatccagatcacgttcaacgcc
cccacaccattcccctacaccgcgctggtcggctccgagagcccaatcatccaggccgca
caatttgccgattgcgtcggcgcccgcgcgcctgaatgcaccgaggccaatttcggcccc
atcggcaccggtcccttcgtcgtcacggacttccgtcccaacgacgtgatcgagcttgtg
gccaacgacaattaccgtgtgcccgagcagccccacttcgcgtccgtgaccttcaaaggc
ggcggcgatgcaacggcggcggcgcggtccgtgctggaaacgggcgagtttgactacgcc
tggaaccttcagatcgacccgacaatcctggcgcaaatggaagcgcaggggaacggcacg
gtcgtgaccgccttcggcacgtccgttgagcgtctgcacctgaaccagaccaaccccgat
gcagcgcttggcgacatgcgctccaccgtggaaggcgggccgcacccgttcctgaccgat
ccgatcgtgggtcaggcgatgtccatggccatcgaccgcgcgctgatcgtggaaatcggc
tacggggcaggcggtcagcccacctgtaacgtccttcccgcgcccgaggcctatgcctcc
accgccaacgatggctgccttgtgcaggacatcgccggtgccaatgcgctgctggatgaa
gcgggccacgtcgacaccgacggcgacggcatccgcgaatacaacggtgttccgatgacg
gttctttatcagacctcgaccaacgccgtccgtcaggacacccaagcgctggtgaagcaa
tggtgggaagaaatcggcatcgggtccgagcttcgcaacatcgacgcatcggtcttcttc
ggtggtgatccggcatcgcccgacacgttccagaagttctatgccgacgtcgaaatgtac
accaacaacttctcgggcgttgacccgcaggcgtatatggccaactggctctgctcggac
attcctggtccggacacccaatggcagggtgcgaacatccagcgcttctgttccgaggac
tatgacgccctcgtggcggaaatggccggtaccgcagacctggccgagcggggccgtctg
gcgatggcaatgaacgacatgatcatgcagtcgtattccatcatcccgctggtccaccgt
ggcggcgtgtcggcccatgccaacactctgggcggtgtgcggatgtccgattgggacacc
gaattgtggaacatcgccgaatggcaccgcatccctgagtga
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