Jannaschia sp. CCS1: Jann_4098
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Entry
Jann_4098 CDS
T00330
Name
(GenBank) carbohydrate ABC transporter substrate-binding protein, CUT1 family
KO
K17321
glycerol transport system substrate-binding protein
Organism
jan
Jannaschia sp. CCS1
Pathway
jan02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Jann_4098
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
jan02000
]
Jann_4098
Transporters [BR:
jan02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Glycerol transporter
Jann_4098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
ABD57015
UniProt:
Q28JU7
LinkDB
All DBs
Position
complement(4206920..4208629)
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AA seq
569 aa
AA seq
DB search
MNLTLRTTSALALTVGLLATPAIADMEAAIAFLDEHIEHSALTREEQEAEMQWFVDAAQP
YQGMEIRVVSETIATHEYEANVLAPIFEAITGISVTHDLIGEGDVVERLQTQMQTGENIY
DAYVNDSDLIGTHWRYQQARNLTDWMANEGADVTNPNLNLDDFIGLSFTTGPDGLLYQLP
DQQFANLYWFRYDWFTDPEIMADFQEQYGYELGVPVNWSAYEDIAEFFTGREIDGVEVFG
HMDYGRRDPSLGWRFTDAWMSMAGMGDIGEPNGLPVDEWGIRVNEDSRPVGSCVARGGAT
NGPAAVYAIESYTNWLTNYAPPEAAGMNFSEAGPLPSQGVIAQQMFWYTAFTASMVGEGA
EAVLNDDGSPRWRMAPSPHGVYWREGQKIGYQDAGSWTLMQSTPVDRAQAAWLYAQFVTS
MTVDVEKSHEGLTFIRESTIQHESFTERAPNLGGLIEFYRSPARTQWSPTGTNVPDYPRL
APLWWQNIGDASSGALTPQEALDNLCAQQEAVLARLERAGVQGDLGPLLNDESDPEFWLS
QDGAPQAALENEDEEPQTVSYDELIQSWQ
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaacccttagaacaacctcggccctggcgctgaccgtggggcttctggccact
ccggccatcgccgatatggaagcggccatcgcgttcctggacgagcatatcgagcattcc
gcgctgacccgcgaagagcaggaagccgagatgcaatggttcgtcgacgcggcccaaccc
tatcagggtatggagatccgcgttgtgtcagagaccatcgccacccacgaatatgaggcc
aatgtgctggcccccatcttcgaggcgatcaccggcatcagcgtcacccacgacctgatc
ggcgaaggcgacgtggtggagcgtctgcaaacgcagatgcagaccggcgaaaacatctat
gacgcctacgtcaacgacagtgatctgatcggcacccactggcgctatcagcaggcccgc
aacctgacggactggatggcgaatgagggcgcggacgttaccaaccccaatctgaacctt
gacgacttcatcggcctgtcgttcacgacgggtcccgatgggctgctgtaccagctgccc
gaccagcagttcgcgaacctctattggttccgctacgactggttcaccgatccagaaatc
atggccgatttccaggagcaatacggctatgagctgggtgttccggtcaactggtctgcc
tatgaggatatcgcggaattcttcaccggtcgtgaaatcgacggtgtcgaggtcttcggt
cacatggactacggtcgtcgcgatccgtcgctgggttggcgtttcaccgatgcgtggatg
tccatggctggcatgggcgacattggcgagccgaacggcctgcccgtcgatgagtggggc
attcgtgtgaacgaagacagccgtcccgtcggctcttgcgtcgcgcgtggcggtgctacc
aacggcccggccgcagtctacgccattgagtcgtacaccaactggctgaccaactacgca
ccgccggaagcggctggtatgaacttctctgaggcggggccactgccgtcgcagggtgtg
attgcgcagcagatgttctggtacacggcgtttaccgcgtcgatggtcggcgagggtgcg
gaagcggtgctgaacgacgacgggtcgccccgttggcggatggcccccagcccgcacggt
gtctactggcgcgaaggtcagaagatcggctaccaggacgcggggtcctggacgttgatg
cagtccacacccgtggaccgggcgcaggccgcatggctttatgctcagttcgtgacgtcg
atgaccgtggatgtcgagaagtcccatgagggcctcacgtttatccgcgagtccacgatc
cagcacgagagcttcaccgagcgtgcgccaaacctggggggtctgatcgagttctatcgc
tcgcccgcccgcacccagtggtcgccaactggtacgaacgtgcctgattatccacgtctg
gcgccgctgtggtggcagaacatcggcgatgcatcgtccggtgcactgaccccgcaagag
gcgctcgataacctttgtgcgcagcaagaggccgttctggcccgtcttgagcgggcaggc
gttcagggggatctcggtccgcttctcaacgatgaaagcgatccggagttctggctgtct
caggacggtgcgccccaggccgcccttgagaacgaggacgaagagccacaaaccgtcagc
tatgacgagctgatccaatcctggcagtaa
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