Jeotgalibaca arthritidis: G7057_04280
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Entry
G7057_04280 CDS
T06477
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
jar
Jeotgalibaca arthritidis
Pathway
jar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G7057_04280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jar03019
]
G7057_04280
03009 Ribosome biogenesis [BR:
jar03009
]
G7057_04280
Enzymes [BR:
jar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
G7057_04280
Messenger RNA biogenesis [BR:
jar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G7057_04280
Ribosome biogenesis [BR:
jar03009
]
Prokaryotic type
rRNA helicases
G7057_04280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QII81767
UniProt:
A0A6G7K948
LinkDB
All DBs
Position
complement(863158..864744)
Genome browser
AA seq
528 aa
AA seq
DB search
MKFSELGLSPELLKSVEAMGFEEATPIQEQTIPLALTGLDVIGQAQTGTGKTAAFGLPML
EKIDRNNRTIQGLVIAPTRELAIQTQEELYRLGREKRITTQVVYGGADISRQIRGLKNNP
HIVVGTPGRLLDLIRRKALKLQNIETLVLDEADEMLNMGFLEDIEAIISETPSETRQTLL
FSATMPPSIKRIGVQFMKNPEHVQIKASEMTANLIDQYFVKCKDFEKFDNMTRLFDVQNP
ELTIIFGRTKRRVDELAKGLELRGYRAEGIHGDLTQKKRMSVLNDFKNGNLDILVATDVA
ARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKEGMSVTFVTPNEMDYLRTIEKLTR
KEMSPLRPPSDKEAMVGQLKNAIDTIEDIIKDTEADKYDNAIKHLLDKYTAEELAAAFLK
SQTKEASEVPVNITPERPLPSRKGGKGGYRGKSGGGYKGKGGGRSNDRRDRGDRNDRGGN
RSRNNEGSKNRSGGGKRRDDRKRDDRSSSGYKGQNKGKKPGFTIRNND
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttcagaactgggattatctcccgaactattaaaatccgttgaagctatgggc
tttgaagaagcaacaccaatccaggaacaaacaattccgttggcactaacagggcttgac
gttattggtcaagcacaaacaggtacaggtaaaactgctgcatttggtctaccaatgctt
gaaaaaatcgaccgtaacaaccgcactattcaagggttagtaattgcaccaactcgtgaa
cttgctatccaaactcaagaagagctataccgcctaggtcgcgaaaaacgtattaccaca
caagttgtttacggtggagctgatattagccgccaaattcgtggcttgaaaaataatcca
cacatcgttgttggaacacctggtcgtctattagaccttatccgtcgtaaagctcttaaa
ttgcaaaatatcgaaacattagttttagacgaagcagacgaaatgctaaacatgggcttc
ttggaagacatcgaagcaattatttcggaaacaccatctgaaactcgtcaaacactattg
ttctcagctacaatgccaccttctatcaaacgtatcggtgtacaatttatgaaaaatcct
gagcacgttcaaattaaagcatcagaaatgactgctaatttgatcgatcaatatttcgtt
aaatgtaaagatttcgagaaatttgataacatgactcgtttattcgatgttcaaaatcca
gaattgacaattatcttcggacgtacaaaacgtcgtgttgatgagttagctaaaggatta
gaactacgtggttaccgcgctgaaggaattcacggtgacttaactcagaaaaaacgtatg
agcgttctaaacgacttcaaaaatgggaatctagatattcttgttgcgactgacgttgca
gctcgtggactagatatttctggtgttactcacgtttataactacgatattcctcaagat
ccagagagctatgttcaccgtattggtcgtacaggccgtgctggtaaagaaggtatgtca
gtaacatttgttacaccaaacgaaatggactacctacgtacaattgaaaaattaacacgt
aaagaaatgtcaccattacgtccaccttcagataaagaagcaatggttggacaattgaaa
aatgcgattgatacaatcgaagacattattaaggatacagaagctgataaatacgataat
gccattaaacatttattggacaagtatacagcagaagaattagctgcagcattccttaag
agccaaacaaaagaagcgtctgaagtacctgtaaatatcactccagaacgtccattacca
tctcgtaaaggtggcaaaggcggttaccgtggtaagagcggtggcggatataaaggtaaa
ggcggcggccgttctaatgaccgtcgtgacagaggcgacagaaatgatagaggcggcaac
cgttcacgtaacaatgaaggtagcaaaaaccgttcaggcggcggcaaacgtcgtgacgat
cgcaaacgcgatgaccgttcatcatctggttataaaggccaaaacaaaggtaaaaaacca
ggatttacaattcgtaacaacgactaa
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