Janthinobacterium tructae: FJQ89_15830
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Entry
FJQ89_15830 CDS
T06359
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
jas
Janthinobacterium tructae
Pathway
jas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FJQ89_15830 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jas03019
]
FJQ89_15830 (pcnB)
Enzymes [BR:
jas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
FJQ89_15830 (pcnB)
Messenger RNA biogenesis [BR:
jas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FJQ89_15830 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
DUF2204
Csc2
Motif
Other DBs
NCBI-ProteinID:
QDG71724
UniProt:
A0A4Y6RGZ6
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All DBs
Position
3611058..3612431
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AA seq
457 aa
AA seq
DB search
MIKKFIRKILGVKKEAARDTTAPIVLGPAQHGIDPKLVSSNAIRVTSSLQEAGFEAFVVG
GAVRDLLLGVKPKDFDIATNATPEQVKRLFRRAFIIGKRFQIVHVMFGQDLLEVTTFRGA
GADSAPKDEHGRVLRDNTFGLQHEDALRRDFTINAMYYNPATQEVLDYHGGVEDIRAKTL
RMIGKPEERYREDPVRMLRVVRFAAKLKFTIEPHTAAPIPIMAPLINNVPAPRVFDEMLK
LLMSGHALACLQQLRKEGLHHGLLPLLDVVLEQPLGAKFVTLALDATDQRIAAGKTVSPG
FLFASLLWHQVLEKWTAYRAAGESTIPALHLAADDVLDSQTEKLALQRKIGSDMRDIWSM
QPRFERRVGKAPHKLLEHLRFRAGYDFLLLRCASGEIDMEIGEWWTAFYEGDEETREALL
VSANAAPGAVKKKRPPRRSTRSKTSTGGSTTGGSSDE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaaaattcatccgcaagatcctcggcgttaaaaaagaggcagcgcgcgacacc
acggcacccatcgtgctcggtcccgcgcaacacggaatcgacccgaaactggtgtcgtcg
aatgccatccgcgtcaccagcagcctgcaggaagccggttttgaggcctttgtcgtcggc
ggcgccgtgcgcgacctgctgctgggcgtcaaacccaaagacttcgacatcgccaccaac
gccacgccggaacaggtcaagcgattgttccgccgcgccttcatcatcggcaagcgcttc
cagatcgtgcacgtgatgttcggccaggatttgctggaagtgacgaccttccgcggcgcc
ggcgccgactccgcaccgaaggatgaacatggccgcgtcctgcgcgacaataccttcggc
ttgcagcacgaagatgcgctgcgccgcgacttcaccatcaacgccatgtactacaacccg
gccacgcaggaagtactcgattaccacggcggcgtggaagatatccgcgccaagaccctg
cgcatgatcggcaagcccgaagagcgctaccgcgaagatcccgtgcgcatgctgcgcgtg
gtgcgctttgccgccaagctgaaattcaccatcgagccgcatacggccgcgccgattccc
atcatggcgccgctgatcaacaatgtgccggcgccgcgcgtgttcgacgagatgctgaaa
ctgctgatgagcggccacgcactggcctgcctgcagcagttgcgcaaggaaggcttgcat
catggcttgctgccgctgctcgacgtggtgctggagcagccgctgggcgcgaaattcgtc
accctggcgctggacgccacggatcaacgcatcgccgccggcaagaccgtctcgccaggc
ttcctgtttgcctcgctgctgtggcaccaggtgctggaaaaatggacggcctaccgcgcc
gccggcgagtcaaccatccccgcgctgcacctggcagccgacgacgtgctcgactcgcaa
acggaaaaactggccctgcagcgcaagatcggttcggacatgcgcgacatctggtcgatg
cagccgcgcttcgagcgccgcgtcggcaaggcgccgcataaactgctggaacacctgcgc
ttccgcgccggctacgacttcctgctgctgcgctgcgcctcgggcgagatcgacatggag
atcggcgagtggtggacagccttttatgagggtgacgaggaaacgcgcgaagcgctgctc
gtcagcgcgaatgccgcgccgggcgccgtcaagaagaagcgcccgccacgccgcagcacg
cgcagcaagacgagtacaggcggctcgaccaccggcggcagcagcgacgaataa
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