Jatropha curcas (Barbados nut): 105630273
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Entry
105630273 CDS
T03922
Name
(RefSeq) ubiquitin receptor RAD23b
KO
K10839
UV excision repair protein RAD23
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03420
Nucleotide excision repair
jcu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105630273
09124 Replication and repair
03420 Nucleotide excision repair
105630273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
jcu03051
]
105630273
03400 DNA repair and recombination proteins [BR:
jcu03400
]
105630273
Proteasome [BR:
jcu03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
105630273
DNA repair and recombination proteins [BR:
jcu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
105630273
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
CUE
Herpes_UL32
UBA_3
Rad60-SLD_2
TECR_N
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
105630273
NCBI-ProteinID:
XP_012067446
LinkDB
All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA
ENKVTEDGFLVVMLSKSKTSSSTGTSSSSAQPAAVTPPTTAATPNLTPAAEVQAPISKST
TSASETATATAQTDTYGQAASNLVAGSNLEQTIQQIMDIGGGNWDKETVTRALRAAYNNP
ERAVDYLYSGIPETAEVAVPRFAAGQATDTGASPTAPASGAPNTSPLNMFPQETLSAGGG
SGGTGGLGSLDFLRNNQQFQALRSMVQANPQILQPMLQELGKQNPQLLRMIQEHNAEFLQ
LINEPLEGSEGDIFDQVDQDMPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEE
LAANYLLENAGDFED
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaccgttaaaactctgaaaggcagccatttcgaaattagggttcagcccacc
gatacagtaatggctgtgaagaagaatattgaagatgtgcaaggaaaggacaattaccct
tgtgggcagcaactattgattcacaatgggaaagtattgaaagatgaaactacattggca
gaaaataaggtcactgaagatggttttcttgttgtcatgcttagcaagagtaaaacttca
agttcaaccgggacctcatcctcatctgcccagcctgctgctgtaactccacctacaact
gcagcaactcctaatttaactcctgcagctgaagttcaagcaccgatctcaaagagcaca
acatcagcttctgaaacagcaacagctactgcacaaactgatacctatggtcaagctgct
tcaaatttagttgctggcagtaatcttgagcaaactattcaacaaataatggatataggc
ggtggcaattgggacaaagaaacagttacacgtgctcttcgagctgcctataacaatcca
gaacgagcagtggattacttgtattctggaatcccagagactgcggaagttgctgtccct
cgttttgctgcaggtcaggcaactgacactggtgcatctcctactgcacctgcatctgga
gcacctaacacatctcccttgaacatgtttcctcaggagacactttctgccggaggtggc
agcggcggcaccggcggacttggatcccttgatttccttagaaacaatcaacagtttcaa
gcattgcgttcaatggttcaagcaaatcctcaaattttacagcctatgcttcaggagctt
ggaaagcaaaacccacaactgttaagaatgattcaagagcataatgcagaatttcttcag
ttaataaatgaacctcttgaaggttctgaaggggatatatttgatcaggttgaccaagat
atgcctcatgctatcaatgtcaccccagctgaacaggaggctattgaacggcttgaggca
atgggatttgatagagccctagtcattgaggcatttttggcatgcgatcgcaatgaggaa
ttggcagctaattacctgttggaaaatgctggagattttgaggattga
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