KEGG   Jatropha curcas: 105640621Help
Entry
105640621         CDS       T03922                                 

Definition
(RefSeq) histone deacetylase 5
  KO
K11407  histone deacetylase 6 [EC:3.5.1.98]
Organism
jcu  Jatropha curcas
Brite
KEGG Orthology (KO) [BR:jcu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatase and associated proteins [BR:jcu01009]
    105640621
  09182 Protein families: genetic information processing
   03019 Messenger RNA Biogenesis [BR:jcu03019]
    105640621
   04131 Membrane trafficking [BR:jcu04131]
    105640621
   03036 Chromosome and associated proteins [BR:jcu03036]
    105640621
Enzymes [BR:jcu01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     105640621
Protein phosphatases and associated proteins [BR:jcu01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     105640621
Messenger RNA biogenesis [BR:jcu03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     105640621
Membrane trafficking [BR:jcu04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    105640621
Chromosome and associated proteins [BR:jcu03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     105640621
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl
Motif
Other DBs
NCBI-GeneID: 105640621
NCBI-ProteinID: XP_012080374
UniProt: A0A067K5E5
LinkDB All DBs
Position
Unknown
AA seq 657 aa AA seqDB search
MEEVESGDSKSRQRRVGIIYDERMCKHFSTVDDYHPENPNRITTIWNKLVANNIPQRCVV
LNAKEAEDKYLLAVHSENHVNLVRNISTKQFDSRRNTIASKFNSIYFNEGSSESAYLAAG
SVIEVAERVAKGELNSAAAIVRPPGHHAEHDEAMGFCLFNNVAVATRFLLDERPELGIKK
ILIVDWDVHHGNGTQKMFFEDPRVLLFSVHRHEFGTFYPANDDGFYTMIGEGPGAGYNIN
VPWENGRCGDPDYLAVWDHILIPVAKEFEPDMIIVSAGFDAAVGDPLGGCRVTPYGYSLM
LKKLMDFANGKIVLALEGGYNLGSIANSFLACVEVLLENKPIAGSSEAYPFESTWRVIQM
VRKKLSAYWPTLADEIPLKLTSQKAPPPHLLISSSDSDDEDRKTPNIVSANFVSAVQEVI
EPLLNIKIEDDHDELATEPTNWRSELSKTDIWYATFGSNMWKPRFLCYIQGGQVDGMRKP
CSGSMDRNPPKAVLWKSFPHRLFFGRESTLTWGPGGAAFLHPESSVGEKTYLCLYRITLE
QFNDVLLQENGYQEMSSPVFDLDALQAITNQGSISLEVFKTGWYHNVVYLGKEQDIPILT
MTCPLSAIERFKSGEVPLRAPCKEYANTLIKGLVEGGRLTEEEAIAYIQEASTKPLC
NT seq 1974 nt NT seq  +upstreamnt  +downstreamnt
atggaggaggtagaatctggtgatagcaagagcaggcaacggcgcgtggggataatctat
gatgagagaatgtgtaagcatttctctaccgttgatgattatcatcctgaaaatcccaat
cgaatcacaaccatttggaacaagcttgtagccaacaacattcctcaaagatgtgttgtt
ttgaacgccaaagaagcagaagataaatatctactagcagttcattccgagaatcatgtt
aatttggttagaaatataagcactaaacaatttgattctcgaaggaatacaattgcttca
aaattcaattctatatactttaatgaaggatcatcagaatctgcttaccttgctgctggc
tctgtcatagaggtggctgagagagttgccaaaggggaattgaattctgctgctgctatt
gtaaggcctcctggacatcatgctgaacatgatgaggcaatgggattttgtctattcaac
aatgtggctgttgcaacaagatttcttttggatgaaagaccagaattgggtattaaaaag
attctgattgttgattgggatgttcatcatgggaatggtactcaaaagatgtttttcgag
gaccctcgagtcttgttgttttctgttcataggcatgagtttgggactttttaccctgct
aacgatgatggtttctatactatgattggagaagggccaggtgctggatataacataaat
gtcccttgggagaatggaagatgtggggatccagactatctagctgtatgggaccatatc
ttgatccctgttgctaaggagtttgaacccgacatgattatagtgtctgccggatttgat
gcagctgttggtgatcctcttggtggttgtcgtgtcacaccgtatggatattcattgatg
ttgaaaaagttgatggattttgccaatggtaagattgtgttggcattggaaggaggttac
aatcttggctctatagcaaattcgttccttgcttgcgtggaagttctgcttgagaacaag
cctattgctggatcctcagaagcctatccatttgaatccacttggcgtgtcatacagatg
gttcgcaagaagttaagtgcttactggcctacacttgcagacgaaatacccttgaagtta
accagtcaaaaagcccctcctccacatcttttgatctcaagctctgattctgacgatgaa
gatcgcaaaactccaaatattgtgtcagcaaattttgtttcagctgttcaggaggttatt
gaaccgcttttgaatataaaaatcgaagatgatcatgatgaactggccacagaacctact
aactggagatcagagctttcaaagacggacatttggtatgctacttttggatcaaatatg
tggaaaccaaggttcctttgttatattcaaggtggtcaggtagatggtatgagaaagcct
tgctctggttcaatggatagaaacccaccaaaagctgttctatggaaaagtttccctcac
agattattctttggtcgtgaatctacacttacatggggtcctggaggggctgctttcctt
catcctgaaagtagcgttggtgaaaaaacttacttgtgcttgtatagaataacgctagaa
cagttcaatgacgttttgcttcaggaaaatggttatcaagagatgagttctccggtattt
gatttggatgcactacaggcaataacaaaccaaggatccatttctttggaggtttttaag
acgggttggtaccacaatgtagtttacctgggaaaggagcaggacatccctatactgact
atgacctgcccactttcggcaatcgaaaggtttaaatcaggggaagtccctttgcgtgca
ccttgcaaagaatatgccaacaccttaataaaaggccttgtggaaggaggacggttaaca
gaggaggaagccattgcttacattcaagaagcctctactaaaccattatgctag

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