Jonesia denitrificans: Jden_1252
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Entry
Jden_1252 CDS
T00972
Name
(GenBank) excinuclease ABC, C subunit
KO
K03703
excinuclease ABC subunit C
Organism
jde
Jonesia denitrificans
Pathway
jde03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
jde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Jden_1252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jde03400
]
Jden_1252
DNA repair and recombination proteins [BR:
jde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Jden_1252
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
HHH_5
GIY-YIG
HHH_2
HHH
UVR
5_3_exonuc
GIY_YIG_domain
UPF0758_N
Motif
Other DBs
NCBI-ProteinID:
ACV08908
UniProt:
C7R451
LinkDB
All DBs
Position
1341702..1343645
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AA seq
647 aa
AA seq
DB search
MADPTTYRPAPGDIPTAPGVYRFRDDQGRVIYVGKAKNLRARLSNYFQSLSALHPRTQAM
VTSAAGVEWTIVSTEVEALALEYTWIKEYDPRFNVKYRDDKSYPYLAVSMSQQVPRAFVT
RSAKKPGDRYFGPFGHAWAIRDTLDQLLRVFPVRTCTQGVYNRAQRSGRPCLLGYIDKCS
APCTGNISQDDHRQLAEDLCDFMAGHTGRFISDVKQRMMDASQALDFETAARLRDDLRAL
ERALEKNAVVLSDATDADVFAVASDELEAAVQVFHVRGGRIRGQRGWIAEKVEALRDDEF
IEHLLQQVYGVHDDSVTPGHAAQAIPRQVLVPVLPADSETMTAWLSTLRGSKVAVRIPQR
GEKAQLAATVHANAEQALRLHKSRRAGDLTTRSQALRELHDALELSEAPLRIECYDVSHN
QGTFQTASMVVFEDGLPKKSAYRLFHIKGNEGDGARDDTEAMYEVISRRFKRHLIHKETR
QTVTTGEVDAHDNSSESPVFAYEPSLVVVDGGAPQVAAAVRALTDLGITDVAVCGLAKRL
EEIWIPHDEFPVILERQSAGLYLLQHLRDEAHRFAIKAHRKRRSQGMTVSQLDGIPGLGP
TRVKALLNHFGSVKKIKEASVDDIAAVKGIGRTTATQVVEFLHPRAE
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggctgacccaaccacctatcgccctgcacctggtgatatccccaccgccccaggtgtc
taccgatttcgcgatgatcagggccgcgtcatctatgtaggtaaagcaaagaacctgcgc
gcccgcctatcgaactacttccaatcactcagtgccctgcacccgcgaactcaagcgatg
gtcacctcagctgccggagttgagtggactatcgtgtcaaccgaagtcgaagcactcgca
ctggaatacacctggatcaaagagtacgacccacgattcaacgtaaaatatcgtgacgac
aagtcatacccctacctggcagtgagcatgtcacagcaagttccgcgtgcgtttgtgaca
cgctcggcgaagaaacccggtgaccgatactttggtccttttggccacgcatgggccatc
agagatacccttgaccagctattgcgggtattcccggtgcgtacttgtacacaaggtgtc
tacaaccgtgcgcaacgatccgggcgtccttgtctgttggggtacatcgacaaatgctcc
gcaccgtgcacaggcaacatatctcaggacgatcaccggcaactcgcagaagatctgtgc
gactttatggccggacacactggtcgtttcatctctgatgtcaaacagcgcatgatggac
gcctctcaagcgctcgactttgaaactgctgcccggttacgtgacgatctgcgtgccttg
gaaagggcattggaaaagaacgcggtggtgttatctgatgcaactgacgctgatgtcttt
gcggtcgcatcagatgaactggaagcagcagtgcaagtgttccatgtcaggggcggccgt
atcagagggcaacgcgggtggatcgcggaaaaagtggaagcgcttcgcgacgacgagttt
attgagcatctccttcaacaggtgtacggcgtccacgatgactctgtaactccaggtcat
gccgcccaagcgatcccacgccaagttctagttcccgtcctccctgcggattcagagacg
atgacagcctggctcagcacactgcgtgggagcaaagtcgctgtgcggataccgcagcgc
ggcgaaaaagcgcagctggctgcaacagttcacgcgaacgcagagcaagcgttacgcctc
cacaaatcccggcgtgctggggatctcaccacccgctctcaagcgttacgcgaactccat
gacgctctggaactcagtgaagccccgctacgcattgaatgttacgacgtctcccacaac
caaggcacgttccaaacagcatccatggtcgtcttcgaggacggcctccccaagaaaagc
gcttaccgacttttccatatcaaaggaaacgaaggagacggggcgcgggatgacactgaa
gcaatgtatgaagtgatctcccggagattcaaacgccacctcatacacaaagaaacccgg
cagacagtcaccactggtgaagtcgacgcacacgacaactccagtgaaagcccagtgttc
gcttacgaaccgtcactcgttgtcgttgatggtggcgcaccgcaggttgcagcggctgtc
cgggcgctgaccgacctgggaatcaccgacgtcgcggtgtgcgggctcgcgaaacggctg
gaagaaatttggataccacatgacgagttccctgtcattcttgaacgtcaatccgcagga
ctgtatttgctccaacacctgcgcgacgaagcgcatcgctttgcaattaaggcacatcga
aagcgccgttcccagggaatgacagtttcccagcttgacggcatacctggtcttgggcca
acccgtgtgaaggccttgctcaaccactttggttcagtgaaaaaaatcaaagaagcgtca
gtggacgacatcgcagcagtgaaagggatcggacgaacgacggcgacacaagttgttgag
ttccttcatccacgcgcagagtaa
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