Jeotgalibaca ciconiae: EJN90_01410
Help
Entry
EJN90_01410 CDS
T05782
Name
(GenBank) isopeptide-forming domain-containing fimbrial protein
Organism
jeh
Jeotgalibaca ciconiae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpaA
Cna_B
GramPos_pilinD1
VWA_2
GramPos_pilinBB
Gram_pos_anchor
VWA
SdrD_B
SpaA_2
PKD
PKD_4
Ig_2
PKD_3
Motif
Other DBs
NCBI-ProteinID:
AZP03430
UniProt:
A0A3S9H7V2
LinkDB
All DBs
Position
complement(285191..290419)
Genome browser
AA seq
1742 aa
AA seq
DB search
MHHRTKYLDKTLMWLLTVVMILPNFIQAFGNITEVAAATTRVVESILYEGSDGSASVVAN
LANDGTTVQWEITLNKNPTEEATLQKLEVDVGGGGLGAPHTISSNVTSESKSGIIQLRPK
ELTPSAQTQIITFTTDVLDTTVSSASLRMLVETVTQETASNTTLHSSPNTKTISLALPIL
EEPEPEIEVPEEVVEMIEESEEPVEEAVVEEVVPEEEITAPVEEVEEVSEETSAEIESEE
GVEETETTTPPEQAESVEEKEEVKEESSSAEEPGKEEESTLPDMDLPIDEVEVVDPNIAE
PVSKDYVSRYFSPTIQGLSKFSTAFKAKTTEDNPGSISLDKTAEECEGCRTYQVTLNITG
VPPVQPLDVVLMLDRSGSMSENTYTYNAITSTPSTQHTYYVKIDGQYQSVSYGNNRWRYS
TGFNWRYVSWSPTGNDSSQGSTNSNNPTPKPFYTRSTVSRMDALKQAAINFASLVLQNPE
NRVAIVSFAGPSSTTGYGNQSEASTDRNFTNNLTQVQSSINGLTPLNGTNTEAGLRQGNT
VFNNGMRQNAKQVAILFTDGLPTASNGNQYNESTNPNSVHFTRAVTASDLIKTYADLYTI
GLTQGMNSSELSAARTFLERVQDSGFYEAPSQDQLQQIFESIFSQLDNYGTNAVVQDVIG
DDFDLVADSLPSGATYNPTTRTISWSIGALINTPTLTYKVKAKDSVIGSGNPEDKLPTNE
WAKLTYTNVNGDRNQEMLFPVPTVHVPLQLEIVNTDVTILKGDSVQLGVGTDPEKENYFE
VTGGTGDYTYAWYLGDQAISTEKNPTVNPTTDTTYKVIVTDQKGCKITGYIRVKVKTGSL
VVKKIDEQGNLIKHSPATFTLSKDGENTVLSTESSGTVIFTALSKGVYTLTETQAPNGYI
KESSVYTVTVEWENGAVKVTVTKSGEEGSPPAVVPSSPLEIVNEKETRDLPVTKHWEDND
DEMALRPENITVHLYQNDMEEPFQTIKIVADEDGNWFGIFKNIPKIDENGVEYVYTVKEE
EVTHYDSTVDGFDIYNTLKVGKLTITKVDKSDPSNPILLDGAEFELRNLDGSVVQDGTTV
DGKLEFEKVPYGTYQLFETKAPAGYSLPNRHWEITIGGDSGSHIEIEILNTKKQVLPATG
GMGTPLFMILGLVLMLGAGVFFKKTKKDGVEKERNKMTKKFRGLFGLLFSLVLLLGAAAP
AVSATGKWDNARPLKGDLIIHKTQFHGTEIPNIEDHNGEIIADFPYAPLAGATFTIYKVA
DDLDVPPADTTGLTAVGSMTTGTNGLATFSNLLAGRYLVVETAQPRGVNYFSPPFLVDVP
MTNETGTEWLDKVHVYAKNQVVLASVAFKKWFETGGETKTATFNLYKLDGATETLIESKT
VTVTSGDSVQVYFDANDLGLETGNYRIRETSVSDPYGVNATPIDFTVGLEDHDNDLSDDK
ASINPLGKEVFKNYITSTPEKENTDDDDDENSANYGEVVEWKLSTRIPADISNYEIFTFR
DDLDSRLDYVPASVRIEVDGVALPLSVATITEPTTQSGGTLAIAFKPADLAAYAGKTIDV
FFDTTINETAVMGEDIPNMFDLEFDNGSGLTTKPSDPDITQTGGAKFDKTSTKDLKDYSG
AKFHVYRLVGNTKEYLQADRTWRSGNENPLILTSDKDGNFEIKGLSFGTYFLEEVTALPG
HMLRDDFEFEVDDTSYAIDPHNVLNMPQIDLPSTGGFGTIAFTIAGIGMMLGAVKLYRKE
EQ
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atgcatcatcgtactaaatatttggataagacgttgatgtggttgctgacagtcgtcatg
atattaccaaatttcattcaagcgtttggtaatataacagaagttgcagcagcaacaaca
agagttgttgaatccattctgtacgaaggttcagacggatcagcatcagtagttgccaat
ctagcaaatgacggaacaacagtccaatgggaaataactctgaataagaatccaacagag
gaagccactttacaaaaactcgaagtagatgtgggtggaggaggcttaggagctcctcat
acaatcagttcaaatgttacaagtgaatccaagagtggcataattcaattacggccaaag
gaactcacccctagtgctcaaacacaaataattacctttactacggatgttttagatacc
actgtttccagtgcatccctcagaatgctcgttgaaacagtcactcaagaaactgcttcg
aacaccacgctccattcttctccgaatactaaaaccatctcattagctctcccaatccta
gaagaacccgaaccagaaatagaagtgccagaagaagtagtagaaatgatagaagaatct
gaagagccggttgaagaagctgtagtagaagaagtggttcctgaagaagaaattacagcc
cccgttgaagaagtggaggaagtttccgaagaaacatctgcagaaatcgaaagtgaagaa
ggtgtggaggaaactgaaactactactcctccggaacaagccgagtctgtagaagaaaaa
gaagaagttaaggaagagtcaagttcagctgaagaaccagggaaagaagaggaatcgact
ctaccggatatggacctgccaattgatgaagtagaggtagtggatcctaatattgcggaa
cccgtatcaaaagactatgtatccagatatttctcaccgactatccaaggactcagcaaa
ttctccactgcttttaaagcaaaaaccactgaagataaccccggaagtatctccttagac
aaaacagctgaagaatgtgaaggctgtcgtacctaccaagtaaccctcaatataacaggt
gtaccgcctgtacaaccactagacgtcgtactgatgcttgatagatcaggaagtatgtca
gaaaatacttatacttataatgctatcacaagtactccgtctactcagcatacctattat
gtaaagattgacggacagtatcaaagtgtatcgtacggaaataaccgttggagatatagc
acgggttttaactggagatatgtcagttggtcgcctacaggaaatgattcatctcaggga
tcaactaattctaataatcctacgcctaaaccattttatacaagaagcactgtaagcagg
atggatgcattgaaacaagcagcaataaactttgcaagtttggttcttcaaaatccagaa
aatcgggttgccatcgtaagtttcgctggaccaagttctacaactggttacggcaatcaa
agtgaagcgtcaactgatagaaatttcaccaacaatctaacacaggtgcagagctctatt
aatggattaactcctctgaatggaaccaacacggaagctgggctgagacaagggaacaca
gtctttaataacggcatgagacaaaacgctaaacaagtggcaatcctctttacggatggc
ctgccaactgcaagtaatggtaatcaatacaatgaaagtacaaatccaaatagcgttcac
ttcacaagggcagttacagcatcggatttgattaaaacttatgcggatctgtataccatt
ggcttaacacaaggaatgaatagcagtgaactttctgctgcgcgcaccttccttgaaaga
gttcaagatagtggtttctatgaagctcctagtcaagaccagctgcaacaaattttcgag
agtattttcagtcagcttgataattatgggaccaatgcagtcgtgcaagatgtgattgga
gatgattttgatttagttgcagattctttaccatctggagcgacttacaatccaacgact
cgaaccatcagttggagcattggcgctttaattaatactcctacattaacctataaagtg
aaggcgaaagattcggtaatcggaagcggtaatccagaagacaagcttccgacaaatgag
tgggccaaactcacttatacgaatgtcaacggggacagaaatcaagaaatgttattccct
gtgccaacggtccatgttccgcttcagttagaaatcgttaacactgacgtaacgattctc
aaaggagattcagttcaattaggtgtagggactgatcctgagaaggaaaactactttgaa
gtaacgggaggaacaggagactatacttatgcttggtatctcggtgatcaagccatttct
acagagaaaaatcctactgtaaacccaacaaccgacacaacttataaagttattgtgact
gatcaaaaaggttgtaaaataactggctacatccgagtgaaagtaaaaacaggctcactt
gttgttaaaaaaattgatgagcaaggaaatctcattaaacattctccagcgacttttaca
ttaagcaaagatggggaaaatactgttttgtccactgagagttcagggaccgtaatattt
acagctttaagtaagggagtctataccttaactgaaacgcaagcaccaaatggttatata
aaagaaagtagtgtttatacggttaccgttgaatgggaaaatggagccgtaaaagttact
gttacaaaatcaggagaagaaggatcccctccggcagttgttccgagtagcccgcttgaa
atcgtgaatgaaaaagagacacgagatttacctgttacaaagcattgggaagataatgat
gatgaaatggctcttcgaccagaaaacattacggtccatctttatcaaaatgatatggaa
gaacctttccaaaccataaaaattgttgctgatgaggatggaaattggtttggtattttc
aaaaatataccaaaaattgatgaaaatggtgtggaatatgtctacacagtgaaagaagag
gaagtcactcattacgactccactgtagatggattcgatatttataacacactcaaggta
gggaagcttaccattactaaagtagataaatctgatccctcaaatccaattttgcttgac
ggtgcagaattcgaattacgcaatttggatggttctgtagtacaggatggaacgaccgta
gatggaaaattagagttcgagaaggttccatatggcacttaccaattgtttgaaacaaag
gcacctgctggttactcactgccaaatcgtcactgggaaattacaatcggtggagactca
gggtcacacatagaaattgaaatactcaataccaagaaacaagttcttcccgctacagga
ggaatgggaacaccgttattcatgattcttggtctagtattaatgcttggcgcaggagtt
ttctttaaaaaaacaaaaaaagatggagtagaaaaggagaggaataaaatgactaagaag
tttagagggctgtttggattactattttctttagtgcttttattaggtgctgcagcaccg
gctgtttcggcaacaggaaaatgggataatgcccgtccgctgaagggtgacttaattatt
cacaaaacacagttccacgggacagaaattcctaatattgaggatcataatggagaaatt
attgctgattttccttatgcacccttagcaggagcaacctttaccatttacaaagttgct
gacgatttagatgtacctccagctgacacaacaggtttgacggccgttggatcaatgaca
acgggtaccaatgggttagcgacattttctaacctgcttgctggtagatatctagttgta
gaaacagcacagcctcgtggtgtaaattatttcagtccgccattcttggtagatgttcca
atgacgaacgaaacaggaacagaatggctcgataaagtccatgtttatgcgaagaatcaa
gttgttttagcttctgttgctttcaaaaaatggtttgaaacaggcggcgaaacgaaaaca
gccacctttaacctctataaactggatggtgctactgaaacgttaattgaaagtaaaact
gttactgtaacttctggagatagcgttcaagtttacttcgatgccaatgatttaggtctg
gaaacaggaaactaccgcattagagaaacaagcgtatcagatccatatggagtgaatgct
accccaattgactttacagtaggtctagaagaccacgataacgatttatctgacgataag
gcatcaattaatccacttggtaaagaagtgtttaaaaactacattacttctacaccagaa
aaggaaaatacagatgacgatgatgatgagaattcagcaaactatggtgaagtggtggaa
tggaaattaagtacaaggattccggcagacatttcaaactatgaaatctttacttttaga
gatgatttagatagtcgtttggactatgtgcctgctagtgtaagaatagaagtagatgga
gtagcacttcctttaagtgttgcaacaattacagaacctactacacaaagcggtggaaca
ttagccatcgcatttaagccagcagatttagcggcttatgctggaaaaactattgatgta
ttcttcgatacaacaattaatgaaacagcagtgatgggtgaagacattccaaatatgttc
gacttagaatttgataatggatctggattaacaacaaaaccttctgatccagatattact
caaacaggtggagcgaaattcgataaaacttctacaaaagatttaaaagactatagcgga
gcaaaattccatgtttataggcttgttggaaatacaaaagaatacttgcaagctgatcgt
acttggagatcaggcaatgagaatccactgatcttaacatctgataaagatggaaacttt
gaaattaaaggactatcatttggaacatacttcttggaagaagtgactgcattgccagga
catatgttacgagatgattttgaattcgaagtagatgatacctcttatgcaattgatccg
cacaatgttctgaatatgcctcaaattgatttaccatctacaggcggattcggtaccatt
gctttcacaattgcaggaatcggcatgatgcttggagctgtaaaactgtatcgcaaagaa
gaacaataa
DBGET
integrated database retrieval system
