Jeotgalibacillus malaysiensis: JMA_27800
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Entry
JMA_27800 CDS
T03570
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
jeo
Jeotgalibacillus malaysiensis
Pathway
jeo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
jeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JMA_27800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jeo03400
]
JMA_27800
DNA repair and recombination proteins [BR:
jeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JMA_27800
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JMA_27800
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
UB2H
AAA_22
AAA
HEM4
AAA_30
AAA_7
AAA_19
AAA_16
AAA_25
HerA_C
DUF87
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
AJD92097
UniProt:
A0A0B5ATQ0
LinkDB
All DBs
Position
complement(2583748..2585730)
Genome browser
AA seq
660 aa
AA seq
DB search
MVQEFDLKSKYQPAGDQPAAIKKLVEGVEKQKRHQTLLGATGTGKTFTVSNVVQEVKRPT
LVIAHNKTLAGQLYSEFKEFFPDNAVEYFVSYYDYYQPEAYVPQTDTFIEKDASINDEID
KLRHSATSSLFERDDVIIISSVSCIYGLGSPEEYKELVVSLRVGMEIERNQLLRRLVDIQ
YERNDIAFTRGTFRVRGDVVEIFPAKNDEHCIRVEFFGDEIDRIRMVDALTGEILGDRDH
VAVFPASHFVTREEKMRVAIENIEKELEEQLKILKEEDKLLEAQRLEQRTRYDLEMMREM
GFCSGIENYSRHLTLREAGATPYTLLDYFPDDFLLVIDESHVTLPQIRGMYNGDQARKKV
LVDHGFRLPSAMDNRPLKFEEFEKHVHNAIYVSATPGPYEIDHTDEMVEQIIRPTGLLDP
TVEIRPSEGQIDDLLGEIQDRIAKNERTLITTLTKKMSEDLTDYLKEIGIKVQYLHSEVK
TLERIEIIRDLRIGKYDVLIGINLLREGLDIPEVSLITILDADKEGFLRSDRSLIQTIGR
AARNSNGHVILYADKVTDSMQRAMDETARRREKQIAYNEEHGITPVTINKEIRDVIRATH
AVEEAEEYVSPAEQMKNLSKKERAKVIESMEIEMKEAARALDFEKAAELRDLVLELKAEG
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaggaatttgatttgaagtcaaaatatcagccggcgggggatcagcctgctgca
attaagaagcttgtagaaggtgtggagaagcagaagcggcatcagactttgcttggtgcg
actggtacggggaagacctttacggtttcgaacgttgtacaggaagtaaagcgcccaacg
ctggtcattgcccataacaaaacgcttgccggacagctttacagtgagtttaaagagttt
tttccggacaatgctgtagaatattttgtcagctattatgattattatcagcctgaagcc
tatgtgcctcagacagatacatttatagaaaaagacgcaagtatcaatgatgaaattgat
aagctgcgtcactcagcgacatcttccctgtttgagcgtgatgatgtcattattatctcg
tctgtttcatgtatttacgggctgggttctcctgaagaatataaagagcttgttgtttca
ctccgtgtcgggatggaaattgagcgaaatcagctgctcagaaggctcgttgatatccag
tatgaacgcaacgatatagcttttacgcgcggaacattccgtgttagaggtgatgtggtt
gaaattttccctgctaaaaacgatgagcactgtattcgcgttgagttttttggtgatgag
attgaccggatcagaatggtagatgcgctgacaggcgaaatccttggtgatcgcgatcat
gtggcagtatttccggcatcccacttcgtaacccgtgaagaaaagatgcgcgtagcgatt
gaaaacattgaaaaggagcttgaagaacagctgaaaattttaaaagaggaagataagctg
cttgaagcgcagcgcctcgaacagcgaacgcgctatgatcttgaaatgatgagagaaatg
ggcttttgctccgggattgagaactattcaagacatctgacgctgcgtgaagcaggtgcg
acaccttatacgctccttgattatttcccggatgattttctactagtcattgatgaatct
cacgtgacgcttccccagattcgcggaatgtataacggagaccaggcacgtaaaaaagtg
cttgtggatcacggattccgtctgccgtcagcgatggataaccgcccattaaaatttgag
gaattcgaaaagcacgtgcataatgccatttatgtatcagcgacgccgggtccatatgaa
atagatcatacagatgaaatggttgaacagatcattcgtccgacagggctgcttgatcca
accgttgaaatccgtccgagtgaaggtcagattgatgacctgcttggtgaaattcaggat
cgaattgcgaaaaatgagcggacgctgatcacaactttaacgaagaaaatgtcagaggat
ctgacagattatctgaaagaaatcggcattaaggttcaataccttcattcagaagtaaag
acgcttgagcggattgagattattagagacctccggattggtaaatatgacgtcttgatc
gggatcaaccttttacgggaagggcttgatattccggaagtatcgcttattacgattctg
gatgcagataaagagggcttcctgcgttctgaccgttcactcattcagacgattggtcgt
gctgcacgtaactcaaatggacacgttattttatatgcagataaagtaactgattccatg
cagcgtgcgatggatgagacagcgagaagacgtgaaaagcagattgcttataatgaagaa
cacggtattacgccggttacaatcaataaagaaatccgtgatgtaatccgtgcgacacat
gcggttgaagaagcggaagaatacgtatcacctgctgagcagatgaagaatctgtctaag
aaagaacgtgcgaaagtcattgagtctatggaaattgaaatgaaggaagcagcacgtgcg
cttgactttgaaaaagcggcggagcttcgtgacctcgttttagaactgaaagcggaagga
tga
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