Jeotgalibacillus malaysiensis: JMA_41750
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Entry
JMA_41750 CDS
T03570
Name
(GenBank) exodeoxyribonuclease V
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
jeo
Jeotgalibacillus malaysiensis
Pathway
jeo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JMA_41750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jeo03400
]
JMA_41750
Enzymes [BR:
jeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
JMA_41750
DNA repair and recombination proteins [BR:
jeo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JMA_41750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
SH3_13
UvrD_C_2
HHH_4
Viral_helicase1
AAA_11
UvrD-helicase
UvrD_C
TrwB_AAD_bind
nSTAND3
Helicase_RecD
HHH_5
T2SSE
Ribosomal_S13
SLFN-g3_helicase
HHH
Motif
Other DBs
NCBI-ProteinID:
AJD93492
UniProt:
A0A0B5AXP9
LinkDB
All DBs
Position
unnamed:363979..366273
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AA seq
764 aa
AA seq
DB search
MSVRATTATSKSENETFRVQFEIKKVMYMDAKTKFAIVKTRIISNTKSGEPLPKEMTIQG
TMVSPFEGDIYEGEGSISLHSTFGRFIKLKGVPTSSLPQVEAQVVEFIKKKIKGVGKKRA
EHIVKTLGVDAISKIANDHRVLLSCGFNELTSLSIHEKLAGHREFELLVEFLQSLAMESD
IANPIYNQLKRDCVKKVKANPYIICPIPQLNFLDAEKIAFSLHHDPVNRNRYREAILYYV
IWRMERYGDICVPKDVLVNEFATGEFLHKISPYKEGNAVDKELVEELIQELLTERFLISD
ESVFNKKTYLYDPGYYHIEEHIIKNLIEIKETHVNPFTERSEIDDFLFFYERKHLKLATR
QREAVYMALENRFSILTGGPGTGKTQTTNTIVKCIEEINPKARIRLLAPTGKASKRMTEV
SGKKAGTIHRTLGMKGFGHAEELTPITEDFAIIDESSMIDAYLFSKLLQNISPQTRLLFV
GDVNQLPSVGPGLVLRDLINSKKIPCVELNEIFRQAAKSQIVTNAHAIIKGKTTKDVDGL
TFDPTKGDSYFVQRLDTQKIQQDILESIRRFMKKGFKMEDILILSAMRGGDLGVEELNRM
IQYEFNPPTSYIDVVKSDGMILRVGDRVMQTENNYDLDVFNGDIGTIASVFVRRTSGKEE
TVIEIEYPDKDDLVEYTDKVIEQLELAYAITIHKSQGSEAPIVIIPIHPTQEMMLDKNLI
YTAYTRAKKVGIFFGDEALLNRSVKRVNTNDRHSLIKEKIVANL
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtacgtgcaacaaccgcaacgtctaaatctgaaaatgagacgtttcgtgttcaa
tttgaaatcaaaaaagtcatgtatatggatgcgaaaaccaaatttgccatcgtcaaaaca
agaatcatctcaaacacaaagagtggagaacctctcccaaaagagatgacgattcaaggg
acgatggtttcaccatttgaaggagatatttatgaaggagaaggcagtatttcacttcat
tccacatttggtcgcttcatcaaattaaaaggtgttcctacttcttcgctccctcaagtt
gaagctcaagtggttgagttcatcaagaaaaagattaaaggcgtcggcaaaaaacgagca
gaacatattgtgaaaaccttaggggtcgatgcgatttcaaagattgcgaatgaccatcga
gtccttctctcatgtgggtttaatgagctgacatctctcagtattcacgagaaattggct
ggacatcgtgaatttgaattacttgtggaatttttgcaaagcttagccatggaatcagat
atcgctaatcccatttacaatcagttaaaacgagattgtgtcaagaaggtaaaggcaaat
ccttatatcatctgccctatcccacagctcaactttttggatgctgaaaaaattgccttt
tctttgcatcatgaccctgtaaaccggaatcgataccgagaagccattctatattatgtg
atttggagaatggaacgttacggggatatctgcgttccaaaggatgtgcttgtaaatgaa
tttgcaactggtgaattcctgcataaaatcagcccttataaagagggaaatgctgttgac
aaagaacttgtggaagaattaattcaagaactacttacagaacgcttcttgatttcagat
gaatcggtcttcaataagaaaacgtatttatacgaccctggttattaccatattgaagag
catattattaaaaatttgattgagattaaagaaacacacgttaatccctttaccgaacgg
tctgaaattgatgatttccttttcttctatgaacgaaaacacctaaaactggcaacacgc
caacgagaagccgtgtatatggcactagaaaatcgtttttctatcctaaccggcggtccc
ggcaccggaaagacacaaacaaccaataccatcgtcaaatgcattgaagaaatcaatccg
aaagctcggattcgcttactcgctccaactggaaaagcgtccaagcgtatgacagaggtt
tctggaaaaaaagccggtacaattcaccggacattagggatgaaggggttcgggcacgca
gaagaattaaccccaatcaccgaagattttgccatcattgatgaaagttccatgattgat
gcgtatttattctccaaacttctccaaaatatttctcctcaaacacgtcttctcttcgta
ggggatgtcaaccaattgccttccgtaggaccggggttggttttacgtgacctcattaat
agcaagaaaattccttgtgttgaattaaacgaaatcttccgtcaagccgcaaagtcacaa
attgtgacaaatgcccatgccatcattaagggaaaaacaacaaaagatgtcgatgggtta
acatttgacccgacaaaaggagactcttattttgtccaacgtcttgatacccagaaaatt
caacaagatattctggagtcgattcgtcgtttcatgaaaaagggattcaagatggaagat
atcttaatcctttctgcgatgcgtgggggagatttaggggtggaagaattgaaccgcatg
attcaatacgagtttaaccctccaacaagttatattgatgttgtaaaaagtgatggaatg
attctacgtgtgggtgaccgtgtgatgcagacagaaaacaactacgacctcgatgtgttc
aacggagatattggaacgattgctagtgtctttgtacgccggacatcaggcaaagaggaa
acggtcattgaaattgaatacccggacaaagatgaccttgtcgaatataccgataaggta
attgaacagttggaactcgcttatgcgattacgattcataagtcacaggggagtgaggct
cctattgttattatcccgattcacccgacacaggaaatgatgttggataagaacttgatt
tacaccgcttacacacgtgcgaaaaaagtcggaatcttcttcggagatgaggcattgcta
aaccgaagcgtaaaacgtgtcaataccaacgaccgccattcgttgattaaagaaaaaatt
gtggcaaatctataa
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