Jeongeupia sp. USM3: BJP62_17255
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Entry
BJP62_17255 CDS
T04552
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
jeu
Jeongeupia sp. USM3
Brite
KEGG Orthology (KO) [BR:
jeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jeu03019
]
BJP62_17255
03009 Ribosome biogenesis [BR:
jeu03009
]
BJP62_17255
Messenger RNA biogenesis [BR:
jeu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BJP62_17255
Ribosome biogenesis [BR:
jeu03009
]
Eukaryotic type
Pre-60S particles
RNases
BJP62_17255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
CTD1
pP_pnuc_1
Motif
Other DBs
NCBI-ProteinID:
AOY02032
UniProt:
A0A1D9BIH0
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All DBs
Position
3669858..3670424
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AA seq
188 aa
AA seq
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MVDQNNLIWLDMEMTGLDPQNDKIIELAIVITDSQLNTVAESPAWAVHQPDAVLDAMDDW
NKSTHGRSGLIDRIKASTLSVEAVEAEALAFIQQYVPQRTSPMCGNSICQDRRFMARWMP
KLEVWFHYRNLDVSTLKELCKRWQPDVHRQFKKKARHEALADIYESIDELKFYREHFLKA
PVSPLLVD
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggttgatcagaacaacctgatctggctggacatggaaatgaccggccttgatccgcag
aacgacaagatcatcgaactggcaatcgtgatcaccgacagccagctgaacaccgtggcc
gaatcgccggcctgggccgtgcaccagcccgatgccgtgctcgacgcgatggacgactgg
aacaagtcgacccacggccgctcgggcctgatcgaccggatcaaggcatcgacactgagc
gtcgaggcggttgaagccgaagcgctggccttcatccagcagtacgtgccgcagcggacc
agcccgatgtgcggcaactcgatctgccaggaccgccgcttcatggcgcgctggatgccc
aagctggaggtctggttccactaccgcaacctcgatgtctcgacgctgaaggagctgtgc
aagcgctggcagccggacgtgcaccgccagttcaagaagaaggcgcgccacgaggcgctg
gccgacatctacgagtcgatcgacgaactcaagttctaccgcgagcacttcctcaaggcg
ccggtgtcgcccttgctggtcgattga
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