Janibacter limosus: EXU32_07935
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Entry
EXU32_07935 CDS
T05853
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
jli
Janibacter limosus
Pathway
jli03030
DNA replication
jli03430
Mismatch repair
jli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EXU32_07935
03430 Mismatch repair
EXU32_07935
03440 Homologous recombination
EXU32_07935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jli03032
]
EXU32_07935
03400 DNA repair and recombination proteins [BR:
jli03400
]
EXU32_07935
Enzymes [BR:
jli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EXU32_07935
DNA replication proteins [BR:
jli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EXU32_07935
DNA repair and recombination proteins [BR:
jli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EXU32_07935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
UVR
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QBF46188
UniProt:
A0A4V0ZAZ2
LinkDB
All DBs
Position
1652466..1654157
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AA seq
563 aa
AA seq
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MEIVQDRLGDLGTPLAEVTFVVVDLETTGGSPRDCGITEIGAVKVRGGVELGELQTFVNP
GEPIPAFIQSLTGITDSMVRDAPRTAEAVASFLEFAKGAVLVAHNAGFDIGFLKAACAAH
DLRWPGPAVLDTVRLARQVVSRDEVANHKLGTLARHFGAATTPDHRALHDARATVDVLHG
LIGRLGSVGVDTLEELSSYSSRVSDELRRKRHLADGLPSAPGVYVFKDERGEALYVGTSV
DIRARARNYFTASEQRRRMGEMVRLATEITPIVCATTLEAQVRELRLIAQHQPRYNRRSR
HPDKVWWLKLTDEVFPRLSIVRSLGPDDLAYAGPFGTRRSAEDAAAALYDAVPLRQCLTR
LSPTRPTSACALADMGRCAAPCTGAVAVEDYAVTVADAVRVLVGDSRPAVAAVRERLHAL
SEGERYEEAAALRDRLGSLVRATSRSQRATPVREASEIIAARRTPRGGWDLVCVRHGRLA
GSSHSPVGADPMPYVAALRACAEVVAPPTGPGTSALPEETELVLRWLEAEGTRLVDIEGE
WTCPVGGAAAAHQELAPALGWAS
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgtccaggacagactcggtgatctcggcacaccactggccgaggtcaccttc
gtcgtggtcgacctcgagaccacgggtggctcccctcgcgactgcggcatcaccgagatc
ggcgcggtcaaggtgcgcgggggtgtcgagctcggcgagctgcagaccttcgtcaacccg
ggcgagccgatccccgccttcatccagtcgctcaccggcatcaccgactcgatggtccgc
gacgcgcctcgcaccgccgaggcggtggccagcttcctcgagttcgccaagggcgcggtc
ctcgtcgcgcacaacgcaggcttcgacatcggcttcctcaaggcggcctgcgcagcccac
gacctgcgctggcccggtcccgccgtgctcgacaccgtgcggctggcgcgccaggtcgtc
tctcgcgacgaggtcgccaaccacaagctggggaccctcgcccgccacttcggcgcggcg
acgacgcccgatcaccgggccctgcacgatgcccgggcgaccgtcgacgtcctgcacggc
ctgatcggccggctcggctcggtcggcgtcgacacgctcgaggagctgagctcctacagc
tcgcgggtcagtgacgagctgcgccgcaagcgccacctggccgacggtctgccgtctgcg
cccggggtctacgtcttcaaggacgagcgcggcgaggcgctctacgtcggcacctcggtc
gacatccgcgcgcgggcccgcaactacttcacggcctccgagcaacgccgccgcatgggc
gagatggtgcgtctggccaccgagatcacaccgatcgtgtgcgcgacgaccctcgaggcc
caggtgcgcgagctgcggctgatcgcccagcaccagccgcgctacaaccgtcgctcgcgc
caccccgacaaggtgtggtggctcaagctcaccgacgaggtcttcccccggctgtcgatc
gtccgctccctcggccccgacgacctggcctacgcgggccccttcggcacccgtcgatcg
gccgaggacgccgcggccgcgttgtacgacgcggtcccgctgcggcagtgcctcacccgc
ctgtcccccacccgcccgacctcggcgtgcgccctcgccgacatgggccgctgcgcggct
ccgtgcacgggagccgtggccgtcgaggactacgccgtgaccgtggccgacgccgtgcgc
gtcctcgtcggcgactcacgtccggccgtggccgccgtgcgggagcgcctgcacgcgctc
tccgagggcgagcgctacgaggaggcagctgccctgcgtgaccggctcggctccctcgta
cgggccacgtcgcgcagccagcgggcgactccggtgcgcgaggcgagcgagatcatcgcc
gcccgccgtacgccgcgagggggctgggacctggtctgcgtgcgccacggacgcctcgcc
ggcagctcgcactcccccgtcggcgccgacccgatgccctatgtggccgcgctgcgcgcc
tgcgccgaggtcgtcgctccaccgaccggaccgggcaccagcgccctgcccgaggagacc
gagctcgtcctgcgctggctcgaggccgaggggacccggctcgtcgacatcgagggcgag
tggacctgtcccgtcggcggcgcagcagccgcccaccaagagctggcgcctgctctaggc
tgggcctcgtga
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