Juglans regia (English walnut): 108983829
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Entry
108983829 CDS
T05245
Name
(RefSeq) serine--tRNA ligase-like
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108983829
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
jre01007
]
108983829
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jre03016
]
108983829
Enzymes [BR:
jre01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
108983829
Amino acid related enzymes [BR:
jre01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
108983829
Transfer RNA biogenesis [BR:
jre03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108983829
Prokaryotic type
108983829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
CENP-F_leu_zip
Laminin_II
TolA_bind_tri
YabA
HAUS-augmin3
Occludin_ELL
FapA
DUF3450
Motif
Other DBs
NCBI-GeneID:
108983829
NCBI-ProteinID:
XP_018811146
UniProt:
A0A2I4DVH0
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All DBs
Position
11:1799564..1805924
Genome browser
AA seq
447 aa
AA seq
DB search
MLDINIFRVEKGGNPDLIRESQRRRFANVQLVDEVIELDKEWRKLQFDLENLRKDLNKIN
KRIAQLRIAGEDTTGMIKDTEENKKSAAEGEVKVREVLKQLNSKLETIGNLVHDSVPISN
DEANNAVIRSWGEKRLEPKLKNHVELVELLGIADLKKGTDVAGGRGFYLKGDGVRLNQAL
INFGLDFLEKRGYTPLQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL
CAYHLDDWIHPSELPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITGPDNNE
SWAMHEEMMKNSEDFYKMLNIPYQVVAIVSGALNDAASKKYDLEGWFPASQTYRELVSCS
NCTDYQSRRLEIRFGQKKSNEQAKKYVHLLNSTLTATERTICSILENHQRADGVEVPEAL
REFMGGKTFLPFKNKPADEAKGKKSKA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgttggacatcaatatcttccgagtagagaagggtggcaaccccgatctcatccgcgaa
tctcaacgacgccgtttcgccaacgtccagctcgttgacgaggtcatcgagctcgacaaa
gaatggcgaaaacttcaattcgatctcgagaatcttcgaaaggatcttaacaagatcaac
aagcgaatcgcacaacttcgaattgctggtgaagacaccactggaatgatcaaggatacg
gaagaaaacaagaagtcagccgcagagggagaagttaaagttcgggaagttttaaaacaa
ttgaattcaaaattagaaaccattggaaatctcgttcatgattctgttccaatcagcaat
gatgaggcaaacaatgcggttatcagatcatggggtgagaaacggttggagccaaaacta
aagaatcatgttgagcttgttgagctccttgggattgctgatttaaagaaaggtactgat
gtggctggaggtagaggtttctacttgaaaggagatggagtgcgtcttaatcaagctctg
atcaactttggtcttgattttttggagaaaagaggatatacaccattgcagactccattt
ttcatgagaaaagatatcatggcaaagtgtgctcaattagcacaatttgatgaagaactt
tacaaggtaactggtgagggtgatgacaaatatctgattgctacagctgaacaaccactt
tgtgcatatcatttggatgattggatccatccttctgagctacccttaagatacgctggt
tattcatcctgctttcgtaaagaggctggttcacatggtcgagatactctgggaatattc
agagttcatcaatttgagaaggttgaacagttttgcattactggcccggataacaatgaa
tcttgggcaatgcacgaggaaatgatgaaaaactccgaggatttctacaagatgctaaac
attccatatcaagttgttgctattgtttctggtgctctcaatgatgcagcttccaagaag
tatgatttggaaggatggtttcctgcatctcagacttacagggagctggtgtcctgctca
aactgtacagactatcagtcaagaagattagaaattcgatttgggcagaaaaagagcaat
gagcaagcaaagaaatatgttcacttattgaactcgacactcacagcaacagagagaaca
atatgctctatacttgagaaccatcagagggccgatggtgttgaggtaccggaagccttg
cgggaatttatgggtggaaagaccttcctacctttcaagaacaagccagccgacgaagcc
aaagggaagaaatcaaaggcctaa
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