Juglans regia (English walnut): 108999241
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Entry
108999241 CDS
T05245
Name
(RefSeq) RNA-dependent RNA polymerase 2
KO
K11699
RNA-dependent RNA polymerase [EC:
2.7.7.48
]
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
jre03036
]
108999241
Enzymes [BR:
jre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.48 RNA-directed RNA polymerase
108999241
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
RDRC (RNA-directed RNA polymerase complex)
108999241
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RdRP
RRM_1
Motif
Other DBs
NCBI-GeneID:
108999241
NCBI-ProteinID:
XP_018831642
UniProt:
A0A2I4FJ22
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Position
2:complement(3551657..3559156)
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AA seq
1110 aa
AA seq
DB search
MGVAERPTVRVSNIPQNVTAHDLLHFLESTLGPDSVFAVDIFTERKNWKSRGFGRVQFTT
LEVKSKAQSLALTFNSHTLRFSETFDDIVVRPVQPKHRLENCVLHVGFMVKEDRMSVLES
WEGVRVWVMPERGRVEFWLWQGGECYKMEVLLPEVLEAVGCGFEGDVNALLLKLKHGPKI
YKRISGPNIFSKFSADRYHICKEDFDYLWVRTIDFSVTKSIGQSTSFYWEIEGLSASDIF
KCFPRYREDMKDLILEDGEEFRSTSTIVPLVKCELSCNLAYEILFQLNSLVHTQKICLAG
AGADLIEILSRLNVETALMILQKLHKLNFTCYEPVSFVKMQLHVLGRNCKRVPPSSYKSL
DPNVMSCHRALVTPSKIYCLGPELESSNYVVKNFAPYASDFMRVSFVEEDWGKLPANAIS
TSIERGIFAKPFRTGIYHRILSVLRDGIVIGPKRFEFLAFSASQLRSNSVWMFASNEKVK
AEDIREWMGCFNKIRSVSKCAARMGQLFSSSFQTLVVPIQDVEIIPDVEVTSDGIDYCFS
DGIGKISLSFAGQVAQKCGLNQTPSAFQIRYGGYKGVVAVDRDSYMKLSLRGSMLKFESK
TRMLNVTKWSESMPCYLNREIISLLSTLGVEDQVFEKLQEEQLCLLGKMLSNREAALNVL
QSLNGSDSRNILVKMLLQGYEPNQEPYLSMMLQAHYENLLSDLKSRCRIFVPKGRILVGC
LDETGILNYGQVYVRVTMTKAELQSWDQSFFRKVDDATCVIVGSVVVTKNPCLHPGDIRV
LEAIYEVDLEERGLVDCLVFPQKGERPHPNECSGGDLDGDQFFISWDKDLIPSQIEPPMD
YTGRRPRVMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVLADREPDKARSKKCLELANL
HSIAVDFAKTGAPAEMPRVLKPKEFPDFMERIEKPMYTSNGVLGKLYHAILGSATRERSN
LVSEKIGQVIYDHNLEVDGFEAFLEIAESHKEQYIEKLSTLMKYYGAENEDEILTGNLRN
REAYLQRDNRKYGDMKDRILHSVKRLQNEAKEWVESSCKNHEHQQLASAWYHVSFHPSYS
REGFNCLSFPWILGDILLNIKSVNSRKVDG
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtggcggagagacccacagttcgggtctcaaacatccctcaaaacgtgacggcc
cacgacctccttcacttcctcgagtccactctcggccccgactctgtcttcgccgtcgat
atattcactgagcgtaagaactggaaatcccggggcttcggccgcgtccagttcaccacc
ctcgaggtcaagtccaaggctcagtcacttgcgctaaccttcaactcccacaccctcagg
ttctcagagacgttcgacgacatcgttgtccgccccgtgcaacccaagcatcgcctcgag
aactgcgttctgcacgtgggtttcatggtgaaagaggatcgcatgagtgttctagagtcg
tgggagggcgtgagggtttgggtcatgcctgagagggggcgggtggagttctggttgtgg
cagggtggggagtgttataaaatggaggttttgcttccggaggttttagaggcagttggg
tgtggttttgaaggagatgtcaatgcacttcttttgaagctcaaacacgggccgaagatc
tataaaagaatttctggacccaatatattttcaaaatttagtgctgaccgttaccatata
tgcaaggaagattttgactatctttgggttcgcacaatagacttttctgttacgaagtca
attggacaatcgacttcattttattgggaaattgaaggattatccgcttcggatattttt
aaatgtttcccacgctatagagaagatatgaaagatctgattttagaggatggggaggaa
ttccgttctacatctacaattgttcctcttgtgaagtgcgaattgagctgtaacttagca
tatgaaatccttttccaactcaactcccttgtccatacccaaaaaatctgtcttgctgga
gcaggtgctgatctgattgagatacttagcagattaaacgttgaaactgctctcatgatt
cttcagaagttgcacaagctgaatttcacttgttacgagcctgtatcatttgtaaaaatg
caattgcatgtcctaggaagaaactgtaaaagggttcccccatcttcctacaaaagttta
gatcctaatgtgatgagttgtcatagagctctagttaccccatcaaagatttattgcttg
ggtcctgagcttgaaagttctaattatgtcgtgaagaattttgcaccatatgcttcagac
tttatgagagtgagttttgttgaagaggattggggtaagcttccagcaaatgccatctcc
acaagtatcgagcgaggtatttttgccaaaccttttagaacgggaatatatcataggata
ttgtctgttcttcgtgacgggattgtgattgggcccaaaagatttgagtttttggctttt
tcagctagtcaactccgatcaaattctgtttggatgtttgcttctaatgaaaaagtaaaa
gcagaagatatcagagaatggatggggtgcttcaacaagattcgcagtgtgtctaaatgt
gcagcaaggatgggtcagttgttcagttcctctttccaaactctggttgtccccatacaa
gatgtagagattattcctgatgttgaagtaacctctgatggtattgactactgcttctca
gatggcattggaaaaatttctctgtctttcgctggccaagttgctcagaagtgtggattg
aatcaaaccccttcagcatttcaaattcgatatggtggatataaaggtgttgtggctgtt
gaccgagattcctatatgaagctatctctgcgtggtagtatgcttaaatttgaatcaaaa
actaggatgcttaatgtcactaaatggagtgagtccatgccttgctatctgaatagggaa
attatttccctcttgtctaccttgggagtggaggaccaagtatttgagaaactgcaagag
gaacaattgtgtctgctgggaaaaatgctatcaaatagagaggcagctttaaatgtctta
cagagcttgaatggctcagattctagaaacattctggtaaaaatgctgctacagggttat
gagccaaatcaggaaccttatctctcaatgatgcttcaagcgcactatgagaacctcttg
tctgatttgaaaagtagatgtcgaatatttgttccaaagggccggatcctggttggttgc
cttgatgaaactggtattttaaactatggccaagtatatgtccgtgttaccatgacaaaa
gctgaactgcaatcttgggatcagagtttcttccggaaggtggatgacgcaacatgtgta
attgtaggtagtgtggttgtaacaaaaaatccttgtcttcacccaggagacatcagagtc
cttgaggccatctatgaagtggatttagaggagagaggtctggtggattgccttgtcttc
cctcagaaaggagaacgaccacatccaaatgaatgctctggtggagatcttgacggagat
caatttttcattagctgggacaaagatctcatcccatctcaaattgagcctcccatggac
tacactgggcgaagaccccgtgtaatggatcatgatgtgaccttagaggaaattcaaaaa
ttttttgtcgattacatgatcaatgatactttgggtgccatctctactgcacatttagtt
ctcgctgaccgtgagccagataaagcccgaagtaaaaaatgtctagagttggcaaacctt
cactcgatagctgttgactttgcaaagactggtgcaccagctgaaatgccaagggtttta
aaaccaaaggaattcccagatttcatggagaggattgaaaaacccatgtatacctccaat
ggagtattggggaaactgtatcatgccattcttggctcagcaacgcgtgaaaggtcaaac
ttggtctcggagaagattggtcaagtaatttatgatcataaccttgaagtagatggtttc
gaggcctttcttgaaattgcagaaagtcataaggagcagtatatagagaaactgagtacc
ttaatgaagtactacggagctgagaatgaagatgagatcctaacgggtaatctgcggaac
cgtgaagcatatttgcagcgtgataacaggaaatatggtgatatgaaggatcggattttg
cactcagtaaaaagattacagaatgaagccaaagaatgggttgaaagtagctgcaaaaat
catgaacatcagcagctggcctctgcatggtatcacgtgagttttcacccaagttattcc
cgggaaggctttaattgccttagctttccgtggatcttaggtgacattttgctgaacata
aaatctgtaaatagcagaaaagttgatggataa
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